Gene Ping_0355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0355 
Symbol 
ID4626732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp456785 
End bp458083 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content41% 
IMG OID639795550 
Productisochorismate synthases 
Protein accessionYP_941817 
Protein GI119944137 
COG category[H] Coenzyme transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1169] Isochorismate synthase 
TIGRFAM ID[TIGR00543] isochorismate synthases 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.065089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACTG CTGAGCATAA TTTCAATTTA ATGGTCATTT TTATTCGTGA ACAATTACAA 
CAGTTTGCAA TAAAACAGGG CGACAAACCA AGCTGCAATC TGGTTATCCC GCTTACCCCG
TTTGATTTAC TTGGTTTATT AAAAGGGCAA TCATTAGACA GCGATGCACT TTATCCAAGA
ATTTACTGGG AGGATATAGA GCATCTGCAA ACTATTGCCT GCTTTGGTGC TATTGATGAA
TGCACCTATA TTCCCGAGCC CATTGGCGAG GCTTGTTACT TTGGCGGCTT GGCTTTCCAG
CAGCAGGGGG TGCAATGGGC AGATTTCCCC GAAATACTTT TTATTCGCCC AGCCTTAGAA
TTTACATTAG AACAGCAAAA ATTAAGATTA ACCTGTCATT TTAACGGCGC TAACAGTATT
GAAAAAAGCT TATTATTAAT AAATTGCCTG CAAAAGCCAG TCTCTCCCGA TGCGGTCAAC
AATATCGTTG TCTCAAGAGA GGATCTGCCG AATCGACAAC AATGGGCTGA GCTGGTTGAA
TCGGCCATTG AGTATAAGGC GTTAATCCCA AAAGTTGTTT TATCAAGGCA GACGGAACTT
ATCTGTGAGC AGAAAGTTAA TCAATGGGAT TTAATTAATC AATGGCAGGA AGCAAACCCA
AATAGTTTTC ATTTTGCCTT TCAGTTTTCT ACAAACCATA CTTTTATCGG TTGCTCTCCG
GAACGGCTTT TTTCTCGAGA AAACAACAGA CTTAAAACCG AAGCCTTAGC TGGAACAGTC
AATCGGGGAA GGGAGCCGCG TGAAGATGCC ATTCTGCGAC AAAGTTTGTT AAGTGATAAA
AAAATTGACC GGGAAAACTA TTTAGTACAA GAATTTATTG TCTCTAGTCT TAAGCGTTTA
AAGGCAGAGG TTACCTGTTC CGAGCCGCAT GTCATGCAAC TGCTTAATGT ACAGCATTTA
CGGGTGGAAA TTAATGCTAA ATTAAATGCG CAAACCAAGG ATGCACATCT TTTACATAAT
TTACATCCCA CCCCGGCTGT AGGGGGCTGC CCAAAACTCC CCGCGCTGCA GTTTATTAAT
GATAAAGAGC ATTATAATCG TGGTTGGTAT GCGGGTACTG TGGGTTATTT GCGCGTCGAT
AAAAGTGATT TTAGTGTTGC CATCCGCAGC GCTCTGGTAT CAAGCAATAA GATCAAATTA
TTTGCCGGTG CCGGCATTGT GGTAGGTTCA ATTGCAGATC AAGAATGGCA GGAATTAGAA
AATAAAATTC ACACTATTTT AGATATTCTA TCGGTGTAA
 
Protein sequence
MLTAEHNFNL MVIFIREQLQ QFAIKQGDKP SCNLVIPLTP FDLLGLLKGQ SLDSDALYPR 
IYWEDIEHLQ TIACFGAIDE CTYIPEPIGE ACYFGGLAFQ QQGVQWADFP EILFIRPALE
FTLEQQKLRL TCHFNGANSI EKSLLLINCL QKPVSPDAVN NIVVSREDLP NRQQWAELVE
SAIEYKALIP KVVLSRQTEL ICEQKVNQWD LINQWQEANP NSFHFAFQFS TNHTFIGCSP
ERLFSRENNR LKTEALAGTV NRGREPREDA ILRQSLLSDK KIDRENYLVQ EFIVSSLKRL
KAEVTCSEPH VMQLLNVQHL RVEINAKLNA QTKDAHLLHN LHPTPAVGGC PKLPALQFIN
DKEHYNRGWY AGTVGYLRVD KSDFSVAIRS ALVSSNKIKL FAGAGIVVGS IADQEWQELE
NKIHTILDIL SV