Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0333 |
Symbol | |
ID | 4624971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 433046 |
End bp | 434296 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639795531 |
Product | O-antigen polymerase |
Protein accession | YP_941798 |
Protein GI | 119944118 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTAAAAA AATGCCTGTT CACAAAAGCG CAATATATCC AGTTTTTTGT TTTTATCTTT TTTTCGATGA CTTTTGCCGT CCGCTCCGGC ACTGGCTACG GCGCCTTCCC TTTGTTATTT ATTGCACTGA TAAGTCTTCC CTCCCTTTAC CGATATATTA AGGCACACCC TTTAACTTTA TTGGAAAAAA GCCTATTAAC CGCCCTTATC GTGTTTGCTT TACTGCCCAT GCTGTCCGCT TATTTTGAAG GATTGTCAGG TAGCGCCTAT GATAAACCTT CCCGTTATCT GCTTTGCGCT CTGACCTTTT TGCTTTTATT GCGTTATAAT GTCTCTTTAC TCAGCATTGC ATTAGGTGCA TGGCTGGGGG CAATATTCGC CGGGACAAAT GCGTTATATG ATGTTTTTTA TCTCGGTATG GAACGTGCCG GCGGACGTTT TACTGTCGTT ATTGAATTTG GTGATATCAG TTTACTCTTA ACCGCCTTTG TTCTTCTTTC CTATCAAAAA CTAAAAAATA AAATACCCCA ATTTCTGATT ATTACCAGCA TATTGCTTGG GCTTACCGCG GTTATACTTT CTCAATCTCG AGGTGGTTGG ATTTTCATCC CCCTTTTAGT TATTATTATC GCCACTCATT ATCGCAATAT TTGCTTTGAT TTAAGTAAAA AAAAGTGGCT TGGCACAGTG TTTTTATTAA CCACTATTTT AGTTGCGGGT TGGTTAAGTG CCGGTGAACT GGTAAGCCAA CGCATTAAGC TGGCTGAAGA TGCAATTATT TCCTACCAAA AAAATGACAA TGTGACACCT GCTGTTGGAG TGCGCTTTGA GATGTGGAAA GGGGGCATAC AGAGTATTAA AAATGCGCCC TTATTCGGTG GTGGTGACAA AGGTATTATA ACAGGCAAGC AGCAATTGAT TGATCAGAAT AAAATCGCAC TCTCACCGGG CATTATTCAG TGGACAAGTG TGCATAATCA ATATTTAGAT ACCTGGGGGA AATATGGTTT TTTCACTTTT ATGGCTTTCT TAGCTATCTT TTTTATTCCA CTGACCTTCT TTATCACCCA GCGGAACAAA GGTGATGCCG ATACGCGCTG CGCATCTTAT TGCGGCATTA CACTCTGCAC CGGTTACCTT TTCTTTGCAT TGACTGAATC TATATTTACA ATCAATTCAA CGGTTATGTT CTATAGTTTT TCACTGATTA TTTTTTACTC TTGTGCAAAA ACAGCAAGAG ATGAGACCTA G
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Protein sequence | MLKKCLFTKA QYIQFFVFIF FSMTFAVRSG TGYGAFPLLF IALISLPSLY RYIKAHPLTL LEKSLLTALI VFALLPMLSA YFEGLSGSAY DKPSRYLLCA LTFLLLLRYN VSLLSIALGA WLGAIFAGTN ALYDVFYLGM ERAGGRFTVV IEFGDISLLL TAFVLLSYQK LKNKIPQFLI ITSILLGLTA VILSQSRGGW IFIPLLVIII ATHYRNICFD LSKKKWLGTV FLLTTILVAG WLSAGELVSQ RIKLAEDAII SYQKNDNVTP AVGVRFEMWK GGIQSIKNAP LFGGGDKGII TGKQQLIDQN KIALSPGIIQ WTSVHNQYLD TWGKYGFFTF MAFLAIFFIP LTFFITQRNK GDADTRCASY CGITLCTGYL FFALTESIFT INSTVMFYSF SLIIFYSCAK TARDET
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