Gene Ping_0333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0333 
Symbol 
ID4624971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp433046 
End bp434296 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content40% 
IMG OID639795531 
ProductO-antigen polymerase 
Protein accessionYP_941798 
Protein GI119944118 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTAAAAA AATGCCTGTT CACAAAAGCG CAATATATCC AGTTTTTTGT TTTTATCTTT 
TTTTCGATGA CTTTTGCCGT CCGCTCCGGC ACTGGCTACG GCGCCTTCCC TTTGTTATTT
ATTGCACTGA TAAGTCTTCC CTCCCTTTAC CGATATATTA AGGCACACCC TTTAACTTTA
TTGGAAAAAA GCCTATTAAC CGCCCTTATC GTGTTTGCTT TACTGCCCAT GCTGTCCGCT
TATTTTGAAG GATTGTCAGG TAGCGCCTAT GATAAACCTT CCCGTTATCT GCTTTGCGCT
CTGACCTTTT TGCTTTTATT GCGTTATAAT GTCTCTTTAC TCAGCATTGC ATTAGGTGCA
TGGCTGGGGG CAATATTCGC CGGGACAAAT GCGTTATATG ATGTTTTTTA TCTCGGTATG
GAACGTGCCG GCGGACGTTT TACTGTCGTT ATTGAATTTG GTGATATCAG TTTACTCTTA
ACCGCCTTTG TTCTTCTTTC CTATCAAAAA CTAAAAAATA AAATACCCCA ATTTCTGATT
ATTACCAGCA TATTGCTTGG GCTTACCGCG GTTATACTTT CTCAATCTCG AGGTGGTTGG
ATTTTCATCC CCCTTTTAGT TATTATTATC GCCACTCATT ATCGCAATAT TTGCTTTGAT
TTAAGTAAAA AAAAGTGGCT TGGCACAGTG TTTTTATTAA CCACTATTTT AGTTGCGGGT
TGGTTAAGTG CCGGTGAACT GGTAAGCCAA CGCATTAAGC TGGCTGAAGA TGCAATTATT
TCCTACCAAA AAAATGACAA TGTGACACCT GCTGTTGGAG TGCGCTTTGA GATGTGGAAA
GGGGGCATAC AGAGTATTAA AAATGCGCCC TTATTCGGTG GTGGTGACAA AGGTATTATA
ACAGGCAAGC AGCAATTGAT TGATCAGAAT AAAATCGCAC TCTCACCGGG CATTATTCAG
TGGACAAGTG TGCATAATCA ATATTTAGAT ACCTGGGGGA AATATGGTTT TTTCACTTTT
ATGGCTTTCT TAGCTATCTT TTTTATTCCA CTGACCTTCT TTATCACCCA GCGGAACAAA
GGTGATGCCG ATACGCGCTG CGCATCTTAT TGCGGCATTA CACTCTGCAC CGGTTACCTT
TTCTTTGCAT TGACTGAATC TATATTTACA ATCAATTCAA CGGTTATGTT CTATAGTTTT
TCACTGATTA TTTTTTACTC TTGTGCAAAA ACAGCAAGAG ATGAGACCTA G
 
Protein sequence
MLKKCLFTKA QYIQFFVFIF FSMTFAVRSG TGYGAFPLLF IALISLPSLY RYIKAHPLTL 
LEKSLLTALI VFALLPMLSA YFEGLSGSAY DKPSRYLLCA LTFLLLLRYN VSLLSIALGA
WLGAIFAGTN ALYDVFYLGM ERAGGRFTVV IEFGDISLLL TAFVLLSYQK LKNKIPQFLI
ITSILLGLTA VILSQSRGGW IFIPLLVIII ATHYRNICFD LSKKKWLGTV FLLTTILVAG
WLSAGELVSQ RIKLAEDAII SYQKNDNVTP AVGVRFEMWK GGIQSIKNAP LFGGGDKGII
TGKQQLIDQN KIALSPGIIQ WTSVHNQYLD TWGKYGFFTF MAFLAIFFIP LTFFITQRNK
GDADTRCASY CGITLCTGYL FFALTESIFT INSTVMFYSF SLIIFYSCAK TARDET