Gene Ping_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0330 
Symbol 
ID4624968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp430068 
End bp430763 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content37% 
IMG OID639795528 
Product3-deoxy-D-manno-octulosonic-acid kinase 
Protein accessionYP_941795 
Protein GI119944115 
COG category[T] Signal transduction mechanisms 
COG ID[COG3642] Mn2+-dependent serine/threonine protein kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAATTA TTGAATGTAA TCAGCAAAGC TTCTTTTTTA ATGCAGAAAA ATTTTCTACA 
TTACTGTTTG ATCTTACCTT CCTTCAGGAA AATAATCGAG TGATAGGGAA TTCGGTTGGG
CGGGGTATTA CCTGGTTTTT TGAGCATCAA CAAAAAAAAT ATGTTCTGCG CCATTATTTT
CGTGGCGGTT TTATTGGGAA AATAAATCCT GATAATTTTT TTTATGCCGG TTTAAAACGT
ACTCGTGCTT ATAACGAGTT TATATTACTC GATAAAATGG CACAATTAAA TTTACCTGTG
CCGTTGCCCT ATGCGGGCAG AATTAGCCGC AAAGGTCTCT TTTATCAAGC GGATCTTATT
ATTGAGTTGA TTGACGGGGC GCATGATTTG GTGGCCGTTC TCAATAAGCG GAAAATAGGC
GAAGCGCAAT GGCGTGAAAT AGGCCGGGTG ATCCGTTTAT TTCATGATAA TAATATTTAT
CACAGCGATC TGAACAGCCA CAATATTATG CTGGACAAGC ACAATAAGGT CTGGTTAATT
GATTTTGATA AATGTGCGCA AATAAAAACG GGTGTTTGGA AAGAAAAGAC GCTAGCGCGC
TTATTACGCT CTTTGCGCAA AGAAAAATCG AAAAAAAACC ACTTAAATTG GTCTGAACAG
GATTGGCTTT CTTTAATTTT TGGCTATCAA AATTAG
 
Protein sequence
MKIIECNQQS FFFNAEKFST LLFDLTFLQE NNRVIGNSVG RGITWFFEHQ QKKYVLRHYF 
RGGFIGKINP DNFFYAGLKR TRAYNEFILL DKMAQLNLPV PLPYAGRISR KGLFYQADLI
IELIDGAHDL VAVLNKRKIG EAQWREIGRV IRLFHDNNIY HSDLNSHNIM LDKHNKVWLI
DFDKCAQIKT GVWKEKTLAR LLRSLRKEKS KKNHLNWSEQ DWLSLIFGYQ N