Gene Ping_0329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0329 
Symbol 
ID4624769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp428896 
End bp429942 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content46% 
IMG OID639795527 
Productglycosyl transferase family protein 
Protein accessionYP_941794 
Protein GI119944114 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGT TCACCAGCGC CCCTAACTCA ATCTGTATTC TACGCCTCAG TGCGATTGGC 
GATGTCTGCC ATGCCATTGC ATGCCTACAG GCCATACAAA GACAATGGCC TAGCACCAAA
ATAACTTGGG TAACAGGGAA ATTAGAGGCG CAACTGCTGC AGCATATTAG TGGCATTGAG
GTGATAATTT TTGATAAAAA ACAGGGGTGG AAAGCTTACA AGCAGTTACG CTGTCGGTTA
AAAGATCGCA AATTTGATGT CCTGCTGCAT ATGCAGGCGG CACTGCGGGC AAGTATTGCA
AGCTTAATGA TCAAAGCTGA TATCAAACTG GGTTTTGACA GGCCGCGCGC AAAAGACGGA
CAGTGGCTAT TTACCAACTG TAAAATAGAG CAGGGAAAAT CGGTCCATGT GTTAGATGGA
TTTATGGCCT TTGCCAAAAA ACTTGGCATC TCTGACCTTT CGGTTAAGTG GAATATTAAC
ATTCCGATTG CAAGCGAGGA AAAAGCCACC ACCCTGATTG ATAATAAACC CACTTTTATT
ATCTGCCCGG CGGCCAGCAA GGCTTATAAA AACTGGACTA TTGAAGGTTA CAGTGCACTT
GCGAACCATG CTATTAAACA AGGTTTTCAA GTGCTTATTT GTGGTGCCCC GACAGAGATT
GAAAAAGCAC TGGCAAAAAA AATTGTCGCC AGCAGCAATC AACAAGCCAA AAACTTAATC
GGGCAAACCT CTCTGATTGA CCTGCTGGCC TTAATCAAGC AAGCCTCGAT TGTGCTGGCC
CCTGACACGG GGCCGACGCA TATGGCCACC ATGGTTAATA CACCGGTTAT CGGTTTATAT
GCTCACCACA ACCCTAAACG TACCGGCCCG TACGCGCAGC TTAGTCATGT TGTCAGCGTT
TATGATACGT TAATAACAGA ACAAAGCGGC AAAACGGCCG AGGAATTACC CTGGCGGGCA
CGCGTAAAAG ATGAAAATGC GATGCAGAAA ATAGCCATAA AAGTGGTGAT CACTATGTTT
GATAACCTTT GCCAAAAACA GGAATAA
 
Protein sequence
MPLFTSAPNS ICILRLSAIG DVCHAIACLQ AIQRQWPSTK ITWVTGKLEA QLLQHISGIE 
VIIFDKKQGW KAYKQLRCRL KDRKFDVLLH MQAALRASIA SLMIKADIKL GFDRPRAKDG
QWLFTNCKIE QGKSVHVLDG FMAFAKKLGI SDLSVKWNIN IPIASEEKAT TLIDNKPTFI
ICPAASKAYK NWTIEGYSAL ANHAIKQGFQ VLICGAPTEI EKALAKKIVA SSNQQAKNLI
GQTSLIDLLA LIKQASIVLA PDTGPTHMAT MVNTPVIGLY AHHNPKRTGP YAQLSHVVSV
YDTLITEQSG KTAEELPWRA RVKDENAMQK IAIKVVITMF DNLCQKQE