Gene Ping_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0325 
Symbol 
ID4624765 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp425409 
End bp426062 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content29% 
IMG OID639795523 
Productexopolysaccharide biosynthesis protein-like protein 
Protein accessionYP_941790 
Protein GI119944110 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3955] Exopolysaccharide biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATAG AAATAGGTAG GAAGGTTGAG AAATACATAA AAAGCAGACT AAGTCGTTTA 
AAATTAAAAC AAAATGATTT TACAATTATC TCTAACAATT GTTGGGGAAC TTTTATGTAT
AAAAAATTTG CCCTTCCTTA CACAACTCCC TTTGTAAATT TATTAATTTT TTCTCCTGAT
TATATTGAAT TATTGGAAAA CTTAACGCCT GAACTGTTAA CCAAAATTTC CTTTATAGAG
CATGAGAACT CTCAACATAA AGAGGAGATG GTTAGACTCA ATATCTATAA AAAAAACTAC
CCAATTGGTA TTTTAGATAA TAAATATGAA CTGCATTTTT TACATTATCA ATCACAACAA
GATGCAAAAG ATAAATGGCT GAAAAGATTG GCAAGAATGA ATTTTGATAA ATTAATCGTT
AAATTCAGTG CATCATTGAA ATTTGAAGAC AATATGGCCG AACGGTTTGA TGATTTGAAC
TTTAAAAACA AAATCTGCTT TACAGCAACA GCGTTTCCAA ACTTAAAAAG TATCGTGTCC
ATGCAAGCAT TTAAAGGTAA AGAGACAGTG ATTGATGAGT GGAAGCATAC AACAAAAAAA
GAATTTGACC TTATTAATTT TATTAACAAT ATACAAAGGG AAGATAAAGC GTAA
 
Protein sequence
MRIEIGRKVE KYIKSRLSRL KLKQNDFTII SNNCWGTFMY KKFALPYTTP FVNLLIFSPD 
YIELLENLTP ELLTKISFIE HENSQHKEEM VRLNIYKKNY PIGILDNKYE LHFLHYQSQQ
DAKDKWLKRL ARMNFDKLIV KFSASLKFED NMAERFDDLN FKNKICFTAT AFPNLKSIVS
MQAFKGKETV IDEWKHTTKK EFDLINFINN IQREDKA