Gene Ping_0316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0316 
Symbol 
ID4624894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp416727 
End bp417734 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content46% 
IMG OID639795514 
Productdelta-aminolevulinic acid dehydratase 
Protein accessionYP_941781 
Protein GI119944101 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0113] Delta-aminolevulinic acid dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATTT CTCAGCACTT CCCTGCGCGA CGCTTGCGTC GTTTGCGTAA GCATGATTTT 
TCTCGTCGTT TAGTTGCCGA AAACCAGCTT TCTGCAAGCG ATCTTATTTA TCCAATGTTT
GTTGTTGAAG GGAAAAACCA ACGCGAAAAG ATAAAGTCTA TGCCGGGTAT CGAGCGGCTT
TCAATTGATT TACTGGTGGC AGAAGCAAAG CAGTTAGTGG CATTAGGCAT TCCAGCTATT
GCCCTGTTTC CGGTGACACC GGACAATATA AAAACCGAGA TGGCCGAGGA AGCATACAAC
CCCGAGGGGC TTGCTCAACG CGCGGTAAGA AGTGTTAAAG AGGCTTGTCC TGAATTAGGG
GTGATCACCG ATGTGGCACT GGATCCTTTC ACTACCCACG GACAAGACGG TATTATTGAT
AAAGAGGGCT ATGTATTAAA TGACATTACA ACCGAGATAC TGGTTAAGCA AGCCCTTTCC
CATGCGCAAG CGGGTGCCGA TATTGTCGCA CCGTCAGATA TGATGGATGG TCGTATTGGT
GCTATTCGTG AAGCATTGGA AAATGCCGGA TTTATTAATA CCCAAATAAT GGCTTACAGT
GCTAAATATG CGTCAAACTA CTACGGCCCT TTTCGGGATG CCGTCGGCAG CGCCGGCAAT
TTAAAAGGTG GCAATAAATC AACCTACCAA ATGGATCCCG CCAACAGTGA TGAAGCAATT
CATGAAGTTG CACTGGATAT TCAAGAGGGC GCTGATATGG TCATGGTTAA ACCCGGCATG
CCCTATTTAG ACATAGTCCG CCGTGTTAAA ACTGAACTGC AGGTCCCTAC TTTTGCATAC
CAGGTAAGTG GCGAATATGC GATGCATAAA GCGGCTATAG ATAATGGTTG GTTAAAAGAG
CGCGAAACGG TTTTAGAATC TTTACTTTGT TTTAAACGTG CAGGGGCAAA CGGCATTCTG
ACCTACTTTG CCAAGCAGGT CGCTATTTGG TTACAAGAAA ATAAATAA
 
Protein sequence
MTISQHFPAR RLRRLRKHDF SRRLVAENQL SASDLIYPMF VVEGKNQREK IKSMPGIERL 
SIDLLVAEAK QLVALGIPAI ALFPVTPDNI KTEMAEEAYN PEGLAQRAVR SVKEACPELG
VITDVALDPF TTHGQDGIID KEGYVLNDIT TEILVKQALS HAQAGADIVA PSDMMDGRIG
AIREALENAG FINTQIMAYS AKYASNYYGP FRDAVGSAGN LKGGNKSTYQ MDPANSDEAI
HEVALDIQEG ADMVMVKPGM PYLDIVRRVK TELQVPTFAY QVSGEYAMHK AAIDNGWLKE
RETVLESLLC FKRAGANGIL TYFAKQVAIW LQENK