| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0314 |
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| Symbol | gcp |
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| ID | 4624892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 414336 |
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| End bp | 415361 |
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| Gene Length | 1026 bp |
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| Protein Length | 341 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 639795512 |
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| Product | O-sialoglycoprotein endopeptidase Gcp |
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| Protein accession | YP_941779 |
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| Protein GI | 119944099 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0533] Metal-dependent proteases with possible chaperone activity |
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| TIGRFAM ID | [TIGR00329] metallohydrolase, glycoprotease/Kae1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0725193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGTATTT TAGGTATTGA AACTTCATGT GATGAAACCG GTATCGCCAT TTATGATGAT
CAACTAGGTT TGTTATCGCA TCAGTTATAT AGTCAAGTTG AATTACATGC TGACTACGGT
GGTGTGGTAC CTGAGCTTGC CTCTCGAGAT CATGTACGTA AAACTATTCC GTTAATTAAA
GAAGCATTAG TGGCTGCAAA TTGTACCAAA GAGAGTCTTG ATGGTATTGC TTATACTGCT
GGACCAGGGT TAGTAGGAGC GTTATTAGTA GGGTCATGTA TTGGGCGCAG TCTGGCCTAT
GCGTGGAATA TACCGGCTAT TGCAGTACAC CATATGGAAG GGCATCTACT GGCCCCTATG
CTCGAAGAAA ATCGTCCGGA ATTTCCGTTT TTGGCGTTGC TGGTATCGGG CGGCCATACG
CTGATGGTTG AGGTTGAAAA TATTGGTGAA TACCAGGTAT TAGGTGAAAG TATTGATGAT
GCTGCTGGAG AGGCCTTTGA TAAGACAGCC AAATTACTTG GACTCGATTA TCCGGGTGGA
CCGCGTTTGG CAAAATTAGC TGAAAAGGGG GAGCCCAAAC GCTTTATTTT TCCACGACCA
ATGACCACTA AACCTGGACT TGATTTTAGT TTTAGTGGAT TAAAAACCTT TGCGGCTAAT
ACCATTGCCA AGGAAGGTAA AGATCCGCAA ACTCAGGCAG ATATTGCCTT GGCATTTCAG
GATGCGGTCA TCGATACGGT TGCTATCAAA TGTAAGCGTG CTTTAAAACA AACAGGATTA
AAGCGCTTAG TTGTGGCGGG TGGCGTCAGC GCCAACCTGT CTTTGCGTAG CCAATTGGCC
GTTTTAATGA AATCCCTTGG TGGTGAAGTT TTTTATCCCC GCAATGAATT TTGTACGGAT
AACGGTGCAA TGATCGCTTA TGCGGGTATG CAGCGCTTAA AAGCCGGGCA TTTTGAAGGC
TTGGGGATTC AGGCAAAACC AAGATGGCCT CTTGATCAGC TGCTTAGCGT GCGCAGCGAG
CTCTGA
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| Protein sequence | MRILGIETSC DETGIAIYDD QLGLLSHQLY SQVELHADYG GVVPELASRD HVRKTIPLIK
EALVAANCTK ESLDGIAYTA GPGLVGALLV GSCIGRSLAY AWNIPAIAVH HMEGHLLAPM
LEENRPEFPF LALLVSGGHT LMVEVENIGE YQVLGESIDD AAGEAFDKTA KLLGLDYPGG
PRLAKLAEKG EPKRFIFPRP MTTKPGLDFS FSGLKTFAAN TIAKEGKDPQ TQADIALAFQ
DAVIDTVAIK CKRALKQTGL KRLVVAGGVS ANLSLRSQLA VLMKSLGGEV FYPRNEFCTD
NGAMIAYAGM QRLKAGHFEG LGIQAKPRWP LDQLLSVRSE L
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