Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0311 |
Symbol | |
ID | 4624889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 411412 |
End bp | 413163 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639795509 |
Product | DNA primase |
Protein accession | YP_941776 |
Protein GI | 119944096 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0358] DNA primase (bacterial type) |
TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.157771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGAC GTATTCCAAG AAATTTTATT GACGATCTTA TTGCTCGTAC TGATATTGTT GATTTTATTG ATAGCCGTGT AAAACTAAAA AAACAGGGTA AAGATTACCG CGCTTGTTGT CCTTTCCATA ATGGTAATAA TAACTCATCA TTTTCAGTCA GTTCAGACAA ACAGTTCTAT CATTGCTTTA ACTGTGGTGT GAGCGGAAAT GTACTCTCTT TTATTATGGA ATATGACGGC ATTGAATTTG TTGATGCCAT CGAAACTCTG GCAGAGCAGT TATCGATAGA AGTCCCTCGC GAAGAAAGCG GCTTTGGAAA AGCACACCAA AGCAGCTATG TAGACCGCAA AGATCTGTAT CAGTTAATGG CTGATATTGC TGTTTTTTAT CAGCAGCAAC TGCGCACGCA CAAAAACAGT CAACAGGTTA TTAATTACCT TAAGGGTCGC GGATTATCGG GGCAGACAGT TAAGCATTTT AAGATAGGTT ATGCACCCGA TGGTTGGAAT GAAGTGCGCA AACGATTCGC AGTGTCTGCC GATTTAGAAA AACAGTTGAT TGAAGCAGGC ATGTTAATAA GCAAAGAAAA AAGTGGCAGT TATGACCGTT TCCGCGATCG ACTGATGTTC CCTATCCACG ATAGGCGTGG CCGAGTTATT GGTTTTGGAG GTCGTGTTTT AGGTGATAAT GAGCCTAAGT ACCTGAATTC TCCCGAAACA CCTCTCTTTC ACAAGGGCAA AGAGCTCTAC GGTTTATACC AGGTTAAGCA AGCCTATAAA GAAATTAAAC GCGTATTAGT GGTTGAAGGT TATATGGATG TTGTGGCACT TGGTCAATTT GGTATTGATT ATGCGGTGGC ATCCCTGGGT ACCAGTACGA CGCCAGAGCA TATCCAACAG CTCTTCCGCC ACACCAGCGA AGTGATTTGT TGTTTTGATG GTGATAAAGC GGGTAAAGCC GCTGCGTGGC GAGCATTAGA AAATGCGCTC CCCTATATAC AAGATGGCCG AACTTTACGT TTTATGTTTC TTGCTGATGG TGAAGATCCT GATAGTTACG TACAAAAAGA GGGTAAAGAA GCCTTTGAAA AACTGATTGA ACAGGCATTA CCTTTATCTG ATTTTCTTTT TCAGCATTTA TTAAATCAAG TTGATATGAG CACTGCTGAC AGCAAAGCTA AACTGGCGCA ATTAGCAATC CCATTAATGA GTAAACTGCC CGACACGGTA TTCAGGCAAA TGATGGAGGG AAGGCTTATT GCGTTATTGG GGATTGAAAA AGAGGGACTC AATAAATTAT TACCCGCAGC AGCATCAAAC AGTAGAATAG ATAAAAGACA AAAAGTAACC CCCATGCGTT TAGCTATTTC GGTGCTTTTA CAGCATCCCA ACATTGCCTA TGGTTTGCCT GAATTTCCTG AATTTAAGGA AATGACCTTA CCTGGCTTAA GTTTATTAAA TTCGTTACTT GAAATTTGCC GTACTACCCC CACTATAACA ACAGGGCAAT TACTGGAACA TTGGCGAGAA AAGCCAGAAA GTAGTCAACT GAATAAATTA GCCGTGTGGC AAAACGATAT AAAAGAAGAT TATTATGAAG CTTTTTTCCT AGACACGTTA GAAAATTTTC TTAATTTTCA TCTTACAAGT AAAATAGAGT TTTTAAAACA AAAATCTCGT TTAGGCCAAG CGCTAACAAG TGCAGAAACA CAGCAACTTG CATTACTGCT TGCTGAACAA AAACAGCACT AA
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Protein sequence | MAGRIPRNFI DDLIARTDIV DFIDSRVKLK KQGKDYRACC PFHNGNNNSS FSVSSDKQFY HCFNCGVSGN VLSFIMEYDG IEFVDAIETL AEQLSIEVPR EESGFGKAHQ SSYVDRKDLY QLMADIAVFY QQQLRTHKNS QQVINYLKGR GLSGQTVKHF KIGYAPDGWN EVRKRFAVSA DLEKQLIEAG MLISKEKSGS YDRFRDRLMF PIHDRRGRVI GFGGRVLGDN EPKYLNSPET PLFHKGKELY GLYQVKQAYK EIKRVLVVEG YMDVVALGQF GIDYAVASLG TSTTPEHIQQ LFRHTSEVIC CFDGDKAGKA AAWRALENAL PYIQDGRTLR FMFLADGEDP DSYVQKEGKE AFEKLIEQAL PLSDFLFQHL LNQVDMSTAD SKAKLAQLAI PLMSKLPDTV FRQMMEGRLI ALLGIEKEGL NKLLPAAASN SRIDKRQKVT PMRLAISVLL QHPNIAYGLP EFPEFKEMTL PGLSLLNSLL EICRTTPTIT TGQLLEHWRE KPESSQLNKL AVWQNDIKED YYEAFFLDTL ENFLNFHLTS KIEFLKQKSR LGQALTSAET QQLALLLAEQ KQH
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