Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0305 |
Symbol | |
ID | 4624882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 401986 |
End bp | 403926 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639795502 |
Product | alpha amylase, catalytic region |
Protein accession | YP_941770 |
Protein GI | 119944090 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGAA TAAATATGGA TTTAACCTTT GAAAGCCAGC GTACTTTAAA GCGCATTCTA GAACTTATTG ATTTATCTAA ACTGACAAAA GATGATTTAG ACATTTTTTT AGCACGATTA GACAAAAATT TCCCTGCGTT ATTTGCCAAG CTATATCACT TATACGGTGA TAAATATGAT TTCTTTTATC ATCTTCAACA ACTGGTGGCC CATCTGGCAG CAGGGATTAT CGCACGCTCG GGGAAACTTA AGAAACAAGA TACACTGCGT CTTAATAAGC CTGATTGGTA CCGTGATCAC AAAATGCTCG GCATGGCCGC TTACGTAGAT CTGTTTGCCG GTGATTTAAA GAAATTAAAA GCGAAAATTC CCTACCTTAA ATCTTTAGGT ATTAATTATT TACACTTGAT GCCGTTATAT AAATCCCCTA AAGGCGACAG CGATGGCGGT TATGCTGTTT CAGACTATCG TGAGGTTGAT CCTAAACTTG GCACAGAAAA AGATCTGCTC GCCCTTTCCG ATGCATTATC AGCTGAGGGG ATAAGTTTAG TATTGGATTT TGTGTTTAAT CATACTTCCG ATGAACACCC ATGGGCAGAG GCCGCCAAGG TCGGCGCTGA AGAATTTACT GATTTTTATT ACTTTTTTGA AAAGAAACAA GAGATTGATG ACTATAACCA AACCTGCCGG GAAATATTCC CGACCGTGCG TCGCGGCAGT TTTACCTATT TAGAAGCACA AAAAAAATGG GTATGGACCA CTTTTAATAG TTTTCAATGG GATCTTAACT ACTCAAATCC TGCAGTTTTT AATGCGATTA CCGATGAAAT GTTGTTTCTG GCAAACCTTG GTTGTGAAGG ACTCCGTTTG GATGCATTGG CTTTTATCTG GAAAGAAAAA TGGACACAAT GTGAGAATTT ACCTAAAGCA CATACGCTTA TTCAAGCTTT TAATTTATGT TTACAAATTG TTGCACCTGC TGTTGTTTTT AAATCTGAAG CCATTGTTCA TCCCGATGAA GTGGCAAAGT ATATTGGTAA AGATGAGTGT CAGTTATCCT ATAACCCGTT AATGATGGCC TTAATGTGGG AAAGTCTGGC AACCCGGGAA ACTAAGTTAT TGACCGCGTC ATTGAAAAAA AGCTTTGCTA TCTCGCCACA ATGCAGCTGG GTTAATTATA TTCGTTGTCA TGACGATATT GGCTGGACCT TTGATGATTC TCTTGCGCAG CAATTGGGCA TTAATGGCTT TGACCACCGC CGTTTTCTTA ATAATTTTTA TACCGGGCGT TTTGAAGGAT CTTTTGCACA GGGTGTGCCA TTTCAAGAAA ACCCCGCCAC TGGAGATTGC CGAGTCTGTG GATCACTGGC TTCATTAACT GGATTGGAAA AAGGGCTTGA ACAAAATAAT CAGCGCGATA TTGATTTTGC ATTAAAGAGG ATCAGCCTGC TTAATAGTAT TAATATGAGC ATCGGTGGTA TTCCTCTTAT TTATCAAGGG GATGAATTGG GTATGTTGAA TGATTACAGT TACCTTGACG ATCACAGCAA AAAAGAGGAT TCGCGTTGGG TTAATCGCCC GGTAATTACC GAAGAGGATA CTAAATTAGC AGAAAAAGCG GGCTCAGCAC AATTTTTCGT TAAGCAATCT TTGCAGGCGA TGATAAATAT TCGCCAGCAG CATCAAGTAT TCGGCATCGC GGAAACTAAG ATTCTTGAAA CTTATAATCC TCATCTGTTT GCTTATTGCC GAATTCATGA AAGTGGCCAG AAAATGTTGG CTATCTGTAA TTTCAGTGAA GAAAGCCAAT CAGTTAACTC TTCCATTACC GACATTTTGG CTTCTAATAA GATGGTGGAT TTACTCACTG CGACTAAGGT TAAGAAAACC GCAGTGCTTG AGCTAGGCGC TTATCAGGTA CTTTGGTTAG TGGCAGAATA G
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Protein sequence | MSRINMDLTF ESQRTLKRIL ELIDLSKLTK DDLDIFLARL DKNFPALFAK LYHLYGDKYD FFYHLQQLVA HLAAGIIARS GKLKKQDTLR LNKPDWYRDH KMLGMAAYVD LFAGDLKKLK AKIPYLKSLG INYLHLMPLY KSPKGDSDGG YAVSDYREVD PKLGTEKDLL ALSDALSAEG ISLVLDFVFN HTSDEHPWAE AAKVGAEEFT DFYYFFEKKQ EIDDYNQTCR EIFPTVRRGS FTYLEAQKKW VWTTFNSFQW DLNYSNPAVF NAITDEMLFL ANLGCEGLRL DALAFIWKEK WTQCENLPKA HTLIQAFNLC LQIVAPAVVF KSEAIVHPDE VAKYIGKDEC QLSYNPLMMA LMWESLATRE TKLLTASLKK SFAISPQCSW VNYIRCHDDI GWTFDDSLAQ QLGINGFDHR RFLNNFYTGR FEGSFAQGVP FQENPATGDC RVCGSLASLT GLEKGLEQNN QRDIDFALKR ISLLNSINMS IGGIPLIYQG DELGMLNDYS YLDDHSKKED SRWVNRPVIT EEDTKLAEKA GSAQFFVKQS LQAMINIRQQ HQVFGIAETK ILETYNPHLF AYCRIHESGQ KMLAICNFSE ESQSVNSSIT DILASNKMVD LLTATKVKKT AVLELGAYQV LWLVAE
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