Gene Ping_0303 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0303 
Symbol 
ID4623722 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp397705 
End bp399873 
Gene Length2169 bp 
Protein Length722 aa 
Translation table11 
GC content42% 
IMG OID639795500 
Productmalate synthase G 
Protein accessionYP_941768 
Protein GI119944088 
COG category[C] Energy production and conversion 
COG ID[COG2225] Malate synthase 
TIGRFAM ID[TIGR01345] malate synthase G 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAC CACAACAAAA ACAGAGTGAA ATTGAGTCAG GTTTTTACAA TTTCATCAAT 
CAAGAAGTAC TGCCACATAC AAATTTGAAT GCTGATGATT TCTGGTTTGA CTTAATGAAA
TTGGTCAACG ATTTTTCACC ACTTAATTCG CAGTTATTAG CCACGCGTAA AACAATGCAG
AAGCAGATTG ATGATTGGCA TCGGTCGCAT CAGAACTTTG ATCAACAGGA CTACCTGAAA
TTTTTAGAAG AAATCGGTTA TTTAGTTGAG CAGGGCGAGT CCTTTAATAT CGAAACAGAG
AATGTGGACA GTGAAATATC CACATTAGCA GGACCGCAAC TGGTTGTACC GGTACAAAAT
GCACGCTTTG CATTAAATGC TGCCAATGCC AGATGGGGCA GTTTATACGA TGCCTATTAC
GGCACTGATC TTATCCAGAA AACCGGCGCG TTAAAACCCG GTTCTGACTT TAATGTAGCC
CGCGGCCAAC GTGTGATTAC CTTAGCTAAA GACTTTCTTG ATGAGGTGTT CCCGCTGGAT
AGCGGCTCGC ACCATGATGT TTTAAGCTAT TTAGTTTATT ACCAGCATCT TCTGGCTTTT
TTCCCGGATG GCAGTAAAAC CGGCTTAAAA ACCCCCGCTC AGTTTATTGC ATTGGATGGT
TCGAAAAGCG ATCCGAGTTA TCTTCTGCTG AAAAACAATG GCTTACATAT TGGCATTGTG
ATTGATCGCC ACGGTAAAAT TGGCTGTTCA GATCTTTCCG GCATTGATGA TATTCAAGTT
GAATCTGCTT TGACGACTAT CATAGATTTT GAAGACTCGA TTTCTGCTGT GGATGCTGAG
GATAAAGTTG AAGCCTACAA AAACTGGCTG GGTTTAATCA AAGGTGATTT AAGCGCAAAT
TTCAGCAAAG ACGGCGAGCA GATGACACGG CAGCTTAATC AGGACAAAGC CTTCATCGAC
AAAGACGGTG AGAAATATGT TGTTCACGGA CGAGCCTTGC TACTAGTGCG TAATGTTGGT
CACTTAATGG GCAGCGATTT AATCCAGGAC AGTGAGGGCA ACAATGCTCC CGAAGGTATT
ATTGATGCTG CGATTACCGC GTTAATCGGC AGTATCGATT TACAGGAAAA AACGAATAAT
AATATCCGCA ATAGTCGTAG CGGCAGCATC TATATTGTTA AACCTAAAAT GCATGGGCCG
GACGAAGTCG CTTTCACCTG TGACTTGTTC AGCCGCGTGG AAGAGATGCT TAAACTGCAG
CCTAATACCA TTAAACTGGG CATTATGGAT GAAGAACGCC GTACATCGGC AAATCTCAAA
GAGTGTATTC GGGTAGCAAA ATCACGGGTG GTCTTTATTA ATACCGGTTT CTTAGACAGA
ACCGGTGATG AAATCCATAC CAGTAAAGAA GCGGGTGCTG TTTATCCTAA AGCGCTGATC
AAAACCCTGC CCTGGTTTGA TGCTTACGAA AATAACAATG TAGATGTTGG ACTCGCCTGT
GGATTCTCTG GAAAAGCGCA GATTGGTAAA GGCATGTGGG CAATGCCCGA TGAAATGAAA
AAAATGATGA AGGAAAAAAT TCAACATCCT TTATCGGGTG CCAATACCGC TTGGGTACCG
TCGCCTACCG CCGCGATATT ACATGCTTTA CATTATCACC AGGTGGATGT TTTTAAAGAA
CAGCTGAAAA TAGCGAAGCG CCCGGCTGCC AAGCAGACGG ATTTGTTAAC TCTTCCTATT
ATGCCGAGTG ATTATCCCTT GTCGTTGGAA GAGATTGAAA AAGAGTTAGA AAACAATATT
CAGGGCATTT TAGGTTACGT GGTGCGTTGG GTTGAAATGG GGATAGGCTG TTCAAAAGTA
CCTGATATTA ACAATGTCGG ATTAATGGAG GATCGCGCTA CCTTGCGTAT TTCAAGTCAG
CATATTGCCA ACTGGTTAAA ACATAATATA TGCAGCACTG AACAAGTAAA TCGTATTATG
CGCAATATGG CAGAAATTGT AGATAAACAA AATGCAGGGG TATCTGGTTA TCAGAACATG
TCTCCTAATT ATGAAACAAA TTACGCATTT CAGGCCGCAG AAGCGTTGAT TTTTGAAGGT
GAAGATCAAC CCAATGGATA TACAGAGCCG TTATTACATG AGTACAGAAT GTTCGCAAAA
ATTTCCTAG
 
Protein sequence
MNLPQQKQSE IESGFYNFIN QEVLPHTNLN ADDFWFDLMK LVNDFSPLNS QLLATRKTMQ 
KQIDDWHRSH QNFDQQDYLK FLEEIGYLVE QGESFNIETE NVDSEISTLA GPQLVVPVQN
ARFALNAANA RWGSLYDAYY GTDLIQKTGA LKPGSDFNVA RGQRVITLAK DFLDEVFPLD
SGSHHDVLSY LVYYQHLLAF FPDGSKTGLK TPAQFIALDG SKSDPSYLLL KNNGLHIGIV
IDRHGKIGCS DLSGIDDIQV ESALTTIIDF EDSISAVDAE DKVEAYKNWL GLIKGDLSAN
FSKDGEQMTR QLNQDKAFID KDGEKYVVHG RALLLVRNVG HLMGSDLIQD SEGNNAPEGI
IDAAITALIG SIDLQEKTNN NIRNSRSGSI YIVKPKMHGP DEVAFTCDLF SRVEEMLKLQ
PNTIKLGIMD EERRTSANLK ECIRVAKSRV VFINTGFLDR TGDEIHTSKE AGAVYPKALI
KTLPWFDAYE NNNVDVGLAC GFSGKAQIGK GMWAMPDEMK KMMKEKIQHP LSGANTAWVP
SPTAAILHAL HYHQVDVFKE QLKIAKRPAA KQTDLLTLPI MPSDYPLSLE EIEKELENNI
QGILGYVVRW VEMGIGCSKV PDINNVGLME DRATLRISSQ HIANWLKHNI CSTEQVNRIM
RNMAEIVDKQ NAGVSGYQNM SPNYETNYAF QAAEALIFEG EDQPNGYTEP LLHEYRMFAK
IS