Gene Ping_0302 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0302 
Symbol 
ID4623721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp395954 
End bp397510 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content45% 
IMG OID639795499 
ProductDNA-binding transcriptional regulator 
Protein accessionYP_941767 
Protein GI119944087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT CAAAAACTTT AATCAGACAA TCGCATTTTC TGGGTACTAA AATCCGTAAC 
TTACGGAAAA GAAATAATTT AACACTCGAT GATTTATCTG CCCGTTGTGT GAAATTAGAG
CCGGAATGCG CACCTTCAGT GTCCTACCTT TCTATGATAG AAAGAGGGAA ACGTGTGCCT
GGTGAAGACA TGCTAGAAGT CATTGCACAG GTTTTTCAAA AAAATATGCA CTGGTTTTTA
GATGACGCAT CGGAGCAGGC TGAAATCACC CCCGAAAAAG GGAGTCGTGG CGGTATAAAC
GGGATGGCGC TTGAGCCAAG TTTTCTTTTT TCAAATGAAA TTCTGCAGAT AGCCATTCCG
GAAATGCTCT CGCAAACAGG CACCAGCGGC AGGCAGTTTG CACACTTACT GATTCGCGCT
CATCAGGAAC ATCACCAGAA TCATTTTCCT GATTTAGAGC GTGCGGCAGA AGAAGTGGGT
AAAAAACGCA TGCCGTTATA TGTTGAAGAC TTAATGGAGA TTGCAGAGCA GAAAGGCCTG
AAAATACGCT GGTTCAGCAA ATTACCCGGT GATCGCCAAA GCCCTGCAAA TGAAAAGTCG
AAGCACATGG TGACTTCCTA TTTTCAGCCC CCCAGCACTG TTTACCTGAA CTCTATTCTG
AAAAAAAATA CTCCCCGCCT AAAATATGAG CTTGCCGTAC ATATTGGTCA CCGTGTTTTA
CACAATAGTG ATGGTGAAAA AAGCATTATG GTCGCGGGAG ATAAAACCCA GTATGACGTG
CAGAATTCGG TGCAAAACCA GTCCTATTCC ACTAGTCTGG ATGCCCAGGA TATATTGCAT
GCATGGCACG ATTTTGAATG CAGTTTTTTT GCCGCAGCCC TGCTCTGCCC TAAGGTGGCT
TTTCGGCAGT TGCTGGATCG TCATGGCTAT GAAGTCAATG TATGCAAACA AATAGACGTA
TCAGAATCTG TTGTTATGCG TCGTATGACC GCTGTTTCAG CCTATCCGAA CTGGCATTAT
TTTGATGCTT ACAGCCCGGG TCAGCTAAAG GCAGTTTACC GGGGTAACGG TATCCCATTA
CCCTGGGGGA ATATGCGCGT CGTAAAAGAT CCCTGCCAGC ACTGGTCTGT ATTTCGCATG
CTCGGCATGA ACGCAAAGGG GACTGCTGCA CAAATATCGA TACTCAATGA AAATGGCGCG
CCCAAAATCT ACTGCTGTGA ATCGATTAAA GTGCAGGATT CGGCAGATGT GAACCATGTT
TTGTGTGCCG GCATTGATTT AAATCCAGCG ATTGACGCAC AAGGTCATGA TGCGCTGGCG
CTGGTTCGAG AATTAAAACA AATTTGTATT GCTAACGGCG GTTCGGCGAC AATCCCTGCG
CATATCAAGA AAGTGTTAAT CAGTGTGGCG CGGATTTTAA ATATTAATTG GATTGAGCGC
GGAATTGCAG GCGAGGCAAG GTTAATTTGT TCTCGGGGAG CCGTCTGTCC GCGACAGCCA
AGTTGTTATA TGGACAAGAC GATTGAGTCT ATTTTTAAAA CTAAGCAGAT TCAGTAA
 
Protein sequence
MKNSKTLIRQ SHFLGTKIRN LRKRNNLTLD DLSARCVKLE PECAPSVSYL SMIERGKRVP 
GEDMLEVIAQ VFQKNMHWFL DDASEQAEIT PEKGSRGGIN GMALEPSFLF SNEILQIAIP
EMLSQTGTSG RQFAHLLIRA HQEHHQNHFP DLERAAEEVG KKRMPLYVED LMEIAEQKGL
KIRWFSKLPG DRQSPANEKS KHMVTSYFQP PSTVYLNSIL KKNTPRLKYE LAVHIGHRVL
HNSDGEKSIM VAGDKTQYDV QNSVQNQSYS TSLDAQDILH AWHDFECSFF AAALLCPKVA
FRQLLDRHGY EVNVCKQIDV SESVVMRRMT AVSAYPNWHY FDAYSPGQLK AVYRGNGIPL
PWGNMRVVKD PCQHWSVFRM LGMNAKGTAA QISILNENGA PKIYCCESIK VQDSADVNHV
LCAGIDLNPA IDAQGHDALA LVRELKQICI ANGGSATIPA HIKKVLISVA RILNINWIER
GIAGEARLIC SRGAVCPRQP SCYMDKTIES IFKTKQIQ