Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0302 |
Symbol | |
ID | 4623721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 395954 |
End bp | 397510 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639795499 |
Product | DNA-binding transcriptional regulator |
Protein accession | YP_941767 |
Protein GI | 119944087 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATT CAAAAACTTT AATCAGACAA TCGCATTTTC TGGGTACTAA AATCCGTAAC TTACGGAAAA GAAATAATTT AACACTCGAT GATTTATCTG CCCGTTGTGT GAAATTAGAG CCGGAATGCG CACCTTCAGT GTCCTACCTT TCTATGATAG AAAGAGGGAA ACGTGTGCCT GGTGAAGACA TGCTAGAAGT CATTGCACAG GTTTTTCAAA AAAATATGCA CTGGTTTTTA GATGACGCAT CGGAGCAGGC TGAAATCACC CCCGAAAAAG GGAGTCGTGG CGGTATAAAC GGGATGGCGC TTGAGCCAAG TTTTCTTTTT TCAAATGAAA TTCTGCAGAT AGCCATTCCG GAAATGCTCT CGCAAACAGG CACCAGCGGC AGGCAGTTTG CACACTTACT GATTCGCGCT CATCAGGAAC ATCACCAGAA TCATTTTCCT GATTTAGAGC GTGCGGCAGA AGAAGTGGGT AAAAAACGCA TGCCGTTATA TGTTGAAGAC TTAATGGAGA TTGCAGAGCA GAAAGGCCTG AAAATACGCT GGTTCAGCAA ATTACCCGGT GATCGCCAAA GCCCTGCAAA TGAAAAGTCG AAGCACATGG TGACTTCCTA TTTTCAGCCC CCCAGCACTG TTTACCTGAA CTCTATTCTG AAAAAAAATA CTCCCCGCCT AAAATATGAG CTTGCCGTAC ATATTGGTCA CCGTGTTTTA CACAATAGTG ATGGTGAAAA AAGCATTATG GTCGCGGGAG ATAAAACCCA GTATGACGTG CAGAATTCGG TGCAAAACCA GTCCTATTCC ACTAGTCTGG ATGCCCAGGA TATATTGCAT GCATGGCACG ATTTTGAATG CAGTTTTTTT GCCGCAGCCC TGCTCTGCCC TAAGGTGGCT TTTCGGCAGT TGCTGGATCG TCATGGCTAT GAAGTCAATG TATGCAAACA AATAGACGTA TCAGAATCTG TTGTTATGCG TCGTATGACC GCTGTTTCAG CCTATCCGAA CTGGCATTAT TTTGATGCTT ACAGCCCGGG TCAGCTAAAG GCAGTTTACC GGGGTAACGG TATCCCATTA CCCTGGGGGA ATATGCGCGT CGTAAAAGAT CCCTGCCAGC ACTGGTCTGT ATTTCGCATG CTCGGCATGA ACGCAAAGGG GACTGCTGCA CAAATATCGA TACTCAATGA AAATGGCGCG CCCAAAATCT ACTGCTGTGA ATCGATTAAA GTGCAGGATT CGGCAGATGT GAACCATGTT TTGTGTGCCG GCATTGATTT AAATCCAGCG ATTGACGCAC AAGGTCATGA TGCGCTGGCG CTGGTTCGAG AATTAAAACA AATTTGTATT GCTAACGGCG GTTCGGCGAC AATCCCTGCG CATATCAAGA AAGTGTTAAT CAGTGTGGCG CGGATTTTAA ATATTAATTG GATTGAGCGC GGAATTGCAG GCGAGGCAAG GTTAATTTGT TCTCGGGGAG CCGTCTGTCC GCGACAGCCA AGTTGTTATA TGGACAAGAC GATTGAGTCT ATTTTTAAAA CTAAGCAGAT TCAGTAA
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Protein sequence | MKNSKTLIRQ SHFLGTKIRN LRKRNNLTLD DLSARCVKLE PECAPSVSYL SMIERGKRVP GEDMLEVIAQ VFQKNMHWFL DDASEQAEIT PEKGSRGGIN GMALEPSFLF SNEILQIAIP EMLSQTGTSG RQFAHLLIRA HQEHHQNHFP DLERAAEEVG KKRMPLYVED LMEIAEQKGL KIRWFSKLPG DRQSPANEKS KHMVTSYFQP PSTVYLNSIL KKNTPRLKYE LAVHIGHRVL HNSDGEKSIM VAGDKTQYDV QNSVQNQSYS TSLDAQDILH AWHDFECSFF AAALLCPKVA FRQLLDRHGY EVNVCKQIDV SESVVMRRMT AVSAYPNWHY FDAYSPGQLK AVYRGNGIPL PWGNMRVVKD PCQHWSVFRM LGMNAKGTAA QISILNENGA PKIYCCESIK VQDSADVNHV LCAGIDLNPA IDAQGHDALA LVRELKQICI ANGGSATIPA HIKKVLISVA RILNINWIER GIAGEARLIC SRGAVCPRQP SCYMDKTIES IFKTKQIQ
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