Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0300 |
Symbol | |
ID | 4623719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 391237 |
End bp | 395031 |
Gene Length | 3795 bp |
Protein Length | 1264 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 639795497 |
Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
Protein accession | YP_941765 |
Protein GI | 119944085 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase [COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGTTTG ATGGTAACTT AGTCGCCGAT TCTACTATTC GTCAAAAAAT TCGAGATTTT CATCGTATCG ATGAAAACTT GGCTGTTGAT CATATTTTGC CTGAGGCAGA AGTTAATATG CGAGCACGTA GCCGTGCCTG GGAGCGAGCG CGCAAAATGG TGCTGCAAAT ACGCCGTGAA CAGGAAGGTA CTGGCGTTGT TGAAGCATTA CTCAATGAGT ATTCTCTTTC TTCGGCTGAA GGTGTGGTGC TAATGTGCCT AGCGGAAGCA TTATTACGGG TACCTGACAA AAAAACTCAG GATGAGCTGA TCCGCGATAA GCTTTCAAAG GGAAAATGGA GTACGCATTT AGGTACCAGT AATTCACTCT TTGTGAATGC ATCATCCTGG GGCCTGCTGT TAACCGGCAG CATGGTTAAC TTCAGCGATA CTCGCAAAAG CAATCAGTTT GGTTTATTGA AAAAAACCCT TGGCCGAATG GGTGAACCAG TTATTCGTAA AGCCATGAAT ATTGCGATGA AAGTCATGGG AGAGCAGTTC GTAATAGGTG AAACTATTGT TGCTGCGGTC AAGCGTGCGG AACAAAAAGA ACGTAATGGT TATGTCTATT CTTACGATGT GCTGGGTGAA GGCGCAAGAA CTGAAAAAGA TGCGGAGCGT TATTTTCAAT CCTATGTTAA GGCACTCGTT GTTATTGGTG AAGCCGCTAA AGGCAGAGGC CCTCGAAAAA GCCCTGGGAT CTCAGTTAAA TTGTCAGCGA TTCATCCCCG CTACGAGTTT AGTCACAGAG ACAGAGTGCT TAAGGAACTC CCGCAAAAAC TAAAATCCTT ATGTTTACTG GCAAAAAAAT ATGATATTGG TTTAACGGTC GATGCTGAAG AATCTGAGCG TCTGGATATC TCTCTTGATA TTATTGAAAT AGTATTTAGC GATCCTGAGT TAAGTGATTG GGATGGTTTC GGTTTGGCGG TTCAAGCTTA TCAGAAGCGG GCTATTTTTG TGATCGACTG GTTGCGCGAG CTAACCGAGA AAGTGGGTCG TAAAATGATG GTACGACTGG TCAAAGGAGC TTATTGGGAT ACTGAGATAA AAAATGCGCA AAAAGACGGG CTTGAGCATT ATCCTGTCTT CACCCGTAAG TCTTCCACCG ATGTGTCTTA TCATGCCTGT GCTAATCGCC TGTTAGACTA TCGCGATACT ATCTATCCTC AATTTGCAAC GCATAATGCT TATACCGCAT CGGTCATTAT TGAGCTTGCC GGTGATGATA AAGAAGGCTT TGAATTCCAA TGTTTACATG GCATGGGAGA CAGTTTGTAT GATCAAATTG TGACCACTGA TAATATTCAA TGTCGAATTT ACGCACCCGT TGGTCAGCAT GAAGATCTGC TCGCTTATCT GGTACGTCGT CTGCTGGAAA ATGGTGCTAA TTCTTCTTTT GTTAATGCCA TCGTTGATGA AACCCGTCCA GTTGAATCTT TGCTTGAAGA TCCTGTCGAA AAAACCCAGC GACTTAAAGT TACCTACAAT GAGCAGATAC TTAAACCGAT CGATTTATTT GGTAAGGAAA GAGATAATTC CAAAGGGCTT GACCTTAACG ATATCAATCA GATAACGCCA TTAAGAGAAT CGCTCGATCG TTGGTTCAAT GATCACTTGC TCACATCAGA CCAAGTGCCT GATGATTGTT TTGCGGTAAA AAATCCGGCT GACCATAATG AAATAATTGG CTTCCATCGT CATGACAGCC GAGAGGAAAT GGTAGCTAAG CTTGAAAAAG CTCACAACAG TTTCGCGACT TGGTCACAAA CTCCGATTGA GGAGAGAGCT AGTTTACTAA GACGAACCGC TGATATTTTA GAACGTCACA TGGACGAACT CATTGCGATT TGTATTAAAG AAGCAGGAAA AATTGCTCAG GACGGCATTG ATGAAGTCCG TGAGGCAGTC GATTTTTGTC GTTATTACGC GGCTAGAGCC GAAGAACTTG CCGAAGATGA CAGACTAGAG CCGCGCGGTG TGGTTTTATG TATCAGCCCA TGGAACTTTC CGCTGGCGAT ATTTATGGGT CAGGTTGCGG CAGCAATTGT AACGGGTAAC ACAGTAATAG CTAAACCCGC TGAACAAACC AGCCTGATAG CTTTACGCGC TCTCGAATTA ATGGAGTCTG TGGGCATGCC CGAGGGCACA GTGACAGCCG TTATTGCTAG AGGTCCTGCC GTTGGTGAAG CGCTGCTTGA AGATGAGCGA ATTAAGGCGG TAGTATTTAC CGGCTCAACA ACGACTGGAA CACATATTTC CCGCATTCTG GCAAACCGGG GTGGAGATCA AATACCGCTG ATCGCAGAGA CTGGGGGCCA GAACTGTATG GTGGTCGACT CAACCGCCTT GCCTGAGCAA GTCATTGATG ATGTCATTTC ATCGGGCTTC CAAAGTGCAG GACAACGCTG TTCAGCTCTG CGCGTCTTAT TTTTACAGGA AGAAATTGCC GATGGTATGA CCGAGATGTT GATCGGTGCG CTAAAGGAAC TTCATATTGG TGACCCTGCT CAACTATCAA CAGACGTTGG ACCGGTGATT GACAGCAAAG CATTAAATAG CCTGGAAGCT CATGTTAAAG ATATGGAGAA TAAAGCTGAA CTGCTTTATG AATGTCCGGT ACCTGAAAAT AACGGCACAT TTTTTGCCCC ACGTCTTTAC CAGATAGCAG ACATCTCGGT ATTAGAACGC GAAGTTTTTG GTCCTTGCGT GCATATCGTC CGGTTTAAGG GCGACCAACT TGCAAATACC ATCGAAAAAA TCAATGCCAC TGGATTTGGA TTAACCATGG GTATTCATAC TCGCATTGAA GAGCGCGCCA TTGAACTCGC TAAGTTGTCG CGCGCAGGGA ATGTCTACAT CAATCGTAAT ATGATAGGTG CGGTGGTTGG AGTACAACCC TTTGGTGGAA CAGGTTTATC CGGTACAGGT CCAAAAGCAG GCGGACCTAA TTATCTTTCT CGCTTTATGA ATGAAAAGGC AACGCCAGCA CCACATCAGG ATGATAGTGT ATTGGGTGAC GACAAAGCGC TGATCAGTGA TAAGGTATCA AATCTGGAAA CGCTTGCCTT TATGAAAAAT GCTATCAAAG TAGAGCCTGA ATGGCGGGTA ACTAATTTAA ATGATCGTAT TTCTGCAGTG CGTCAGCTTC TTGCCCAAAT TGCGAAGGTG ACCATTGTTG AAGAATTAGC CGATGATTTT AATTCAACAC TCGCGGCAGC AAGATCGCAG CTGATAAGCA TTGAAAAAAA GATGAGAAGA CCAAAGGCAC TGCCTGGGCC TACCGGTGAA TCTAACGTAT TGTACTTAGA GCCTCGCGGT ATTCTGGTAT GTTTTGCGGA TAAAAATGTA ACTTTCGAAT ATTGGACCTT AGCAATAGTA ACTGCATTAG CCACCGGTAA TACGGTTATT TCGGTGGTTT CTGACTTGTT TTATGAGGAA GCATTGGCAT TCAGAGATAA ATTTAACGCG ACGGGTGCTC CTGAAGGAGT GCTTCAAGTA GCTAAATTAT GTCATTTAGA AGCCTTACTG GAGCAGGATA AATTGGCGGG TGTGGTCATT GACAGTCACA GTCCACGTCG TACCTTTATG GTGCGTAAAT TGGCCGAACG TGAAGGTGCA ATACTGCCGG TAATAACCTC AGAATACACT GATCACTTGA TTCAACGACT ACTCACTGAA AAGAGCATCA GTATAGATAT CACTGCATCA GGCGGTAATA CCTCTCTGAT GACCTTGGTT GAAGAGGAAG ACTAG
|
Protein sequence | MLFDGNLVAD STIRQKIRDF HRIDENLAVD HILPEAEVNM RARSRAWERA RKMVLQIRRE QEGTGVVEAL LNEYSLSSAE GVVLMCLAEA LLRVPDKKTQ DELIRDKLSK GKWSTHLGTS NSLFVNASSW GLLLTGSMVN FSDTRKSNQF GLLKKTLGRM GEPVIRKAMN IAMKVMGEQF VIGETIVAAV KRAEQKERNG YVYSYDVLGE GARTEKDAER YFQSYVKALV VIGEAAKGRG PRKSPGISVK LSAIHPRYEF SHRDRVLKEL PQKLKSLCLL AKKYDIGLTV DAEESERLDI SLDIIEIVFS DPELSDWDGF GLAVQAYQKR AIFVIDWLRE LTEKVGRKMM VRLVKGAYWD TEIKNAQKDG LEHYPVFTRK SSTDVSYHAC ANRLLDYRDT IYPQFATHNA YTASVIIELA GDDKEGFEFQ CLHGMGDSLY DQIVTTDNIQ CRIYAPVGQH EDLLAYLVRR LLENGANSSF VNAIVDETRP VESLLEDPVE KTQRLKVTYN EQILKPIDLF GKERDNSKGL DLNDINQITP LRESLDRWFN DHLLTSDQVP DDCFAVKNPA DHNEIIGFHR HDSREEMVAK LEKAHNSFAT WSQTPIEERA SLLRRTADIL ERHMDELIAI CIKEAGKIAQ DGIDEVREAV DFCRYYAARA EELAEDDRLE PRGVVLCISP WNFPLAIFMG QVAAAIVTGN TVIAKPAEQT SLIALRALEL MESVGMPEGT VTAVIARGPA VGEALLEDER IKAVVFTGST TTGTHISRIL ANRGGDQIPL IAETGGQNCM VVDSTALPEQ VIDDVISSGF QSAGQRCSAL RVLFLQEEIA DGMTEMLIGA LKELHIGDPA QLSTDVGPVI DSKALNSLEA HVKDMENKAE LLYECPVPEN NGTFFAPRLY QIADISVLER EVFGPCVHIV RFKGDQLANT IEKINATGFG LTMGIHTRIE ERAIELAKLS RAGNVYINRN MIGAVVGVQP FGGTGLSGTG PKAGGPNYLS RFMNEKATPA PHQDDSVLGD DKALISDKVS NLETLAFMKN AIKVEPEWRV TNLNDRISAV RQLLAQIAKV TIVEELADDF NSTLAAARSQ LISIEKKMRR PKALPGPTGE SNVLYLEPRG ILVCFADKNV TFEYWTLAIV TALATGNTVI SVVSDLFYEE ALAFRDKFNA TGAPEGVLQV AKLCHLEALL EQDKLAGVVI DSHSPRRTFM VRKLAEREGA ILPVITSEYT DHLIQRLLTE KSISIDITAS GGNTSLMTLV EEED
|
| |