Gene Ping_0296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0296 
Symbol 
ID4623715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp385109 
End bp385891 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content35% 
IMG OID639795493 
Productarginine ABC transporter solute-binding protein 
Protein accessionYP_941761 
Protein GI119944081 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTGGA TATTAAACAA CATGCTTATT TTGCGCTTTT TTCTTTCAAT ATTTCTATTG 
TTTTCGCCCC TTACTGTCTT ATCCTCGACA GCCGTTCCTA ACGATAATAT AAAAGTTCGT
TTTGCGACCG ATGCAAATTA TTACCCTTTT GAATACTTAG ATGAACAGCA ACAGATTCAA
GGTTTTGATA TTGATATGGC TAAAGCGATT TGTAAAGCCG TTAATTTAAC CTGCAGTTTT
CACCATCAAC GTTTTGAGAG CCTGCTACTG TCATTATCTT TCGCTCGTTT TGATGCGGTT
ATTTCCGCTT TAGATATTAC CAGCGAACGT TTAAAAACAG TGGGTTTCAC CAATAGTTAT
TATGAAAATA CGCCCGTCTT TATCAGTAAA AAATCAGCTG AAGAACGTTT CTCAACGGTG
GGCAAATTTA TAGGTGTGCG TTCCAACTCA TCCAACCAGG AATATTTAAT TAAATATGAA
AAAGAGAATA GTTTTATCAT CTCTTATGTC ACCTATTACG AAATTCTTTC GGATTTAAGT
GCCGAAAAAA TTGATGCGGC ATTTGTCGAT CAAGCGGTCG CATCGGAATT TTTAAAACAA
AAAGATAATC GCATTCATTT TGACGTTCAG AAAATTAATT CTTCCCAGAG GAAATTATTT
TCGCAAGGCT ATGGTATCGC GATTCAAAAA GGAAATGTCA TCCTGCAAAA CCGCTTGAAT
TTGGGTCTTA AAATTATTAC TGAAAATGGT ACTTACCAAA AAATATATGA ACGCTATTTT
TAA
 
Protein sequence
MNWILNNMLI LRFFLSIFLL FSPLTVLSST AVPNDNIKVR FATDANYYPF EYLDEQQQIQ 
GFDIDMAKAI CKAVNLTCSF HHQRFESLLL SLSFARFDAV ISALDITSER LKTVGFTNSY
YENTPVFISK KSAEERFSTV GKFIGVRSNS SNQEYLIKYE KENSFIISYV TYYEILSDLS
AEKIDAAFVD QAVASEFLKQ KDNRIHFDVQ KINSSQRKLF SQGYGIAIQK GNVILQNRLN
LGLKIITENG TYQKIYERYF