| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0293 |
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| Symbol | |
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| ID | 4623712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 381835 |
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| End bp | 383748 |
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| Gene Length | 1914 bp |
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| Protein Length | 637 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639795490 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_941758 |
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| Protein GI | 119944078 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.598213 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATAAAT TCTTACTACT GTGTTGCGGT TTTTTCTCTC TGACAAGTTT TGTCGCGGCT
GATGATCTCG ATAAGCAAAG AGAGCTCTAC TCTCAGGCTG TTGTTTTACA AGCACAAGGT
GAGTGGGAGC AAGCACAAAA AACCGCAGCA TTAATCGCTG AATATCCGTT AACTTACCTG
CTTGAATTCG AGACTATTAA GGCACATTTT GCTACCAATA ATGCAGCAGC GGTGCACGCA
TTTATTAACA ACAACCCCAA CCGCAGTCTT TCTTTAGATT TAGAAAGAGA TTATTTACGC
TTTTTAGCAA GAAATTACGC CTGGAAGGAA TTTTTGGATT TTTATCCGCA ATTGCCTAAT
AGTGAGGATC TCAAATGTAA TTACTTCCAA GCAAAAATAA ACCAGGGTAA GACGGAAGAA
ATTTGGCCTG AATTTAAAAA AACCTGGTTA ACGGGAAGCT CCTTACCGCC AGCCTGTGAT
AATGTTATTG CGGTTTACCG GGACAATAAC ACCCTTTCAG AAAAATTAGT TTGGCAACGT
TTTAGCTTGG CTTATCAAAA TAATTCCCCT GCATTAATGC GTTATTTAAC TACTTGGATG
AAAGGGGATA ATAGGGTGCT CGCAACCCAA TTATATGCGT TATATAAAAA ACCTGAGAGC
TTGCTGAACA GTGAATTATT TCAAAGTAGA ACGCAGGCTA GTTTTCTATT TTTACAAATG
AGTATTAAAC GCTTAGCTCG AGTCGATCTG AATTCGGCAA TGGATTTGTT TAATCGTTAT
GAGAAAAAAA TCCCCTTTAC TGCCTCTGAA AGCCAGACAT TAAAAAAATA TTTTGCATTA
CGAACCCTAT TGTATGAGGT GGAGAGTCAA CTGCCATGGT TAGATAAAGA GCTTGTCTCT
TTAGATGATG ACGGATTGTT TGAACTGCGA ATTCGCTATG CAATAAAATT GGATAATTGG
AAAGATATTG AATATTGGTT AAACGTCTTG CCGGAAAGGT TACAAGAAAA AGACAAATGG
ATATATTGGC AAGCGCGTGT ATTAGAAAAT AAAAAACAGC AGAAACAAGC CGATAAACTC
TATCTTAAGA TTGCCGGGCA AAGACGTTAT TATAGTTTTC TGGCGGCTCA AAAGCTGGGC
CTTGATTATC AGCTTAATGC CAAGTTAGTC AGTGAAAAGA GTGACAGCTT AAAGATGAAA
AAAGCAGATC TTGCTTATAT TGGAGAGTTA GCATACCAAA AACACAATGC ACTTTTAAAG
CGGGAATGGT ATGCACTATT AAATAATAAC GATAAAAATA CACAACTGCA GTTAGGCTTG
TACGCATACC AAAAGGGTTG GGCACATCTG TCTGTGATGG CCAGTATTAA CAGCAAGAGT
TGGGATGCGT TGAATATACG TTTCCCCAAG GTAAAATCTG GCTTATTTGC AAATACGGCA
AATCAATACC AATTGGAGCC AACTTATATT TATGCTCTGA CTCGTCGGGA GAGTGCTTTT
GACGAGTATG CTCAATCTCG AGTGGGTGCC AGTGGTTATA TGCAGCTGAT GCCTGCGACT
GCAAAAGAAA CGGCGCAAAT GATAGGCATG AAAGATTATA AAAATCAGGC ACAGTTAAAT
GATGGTGCTA TTAATGTGCA GTTAGGCACA GCCTATTTTG ATATGTTATT AAAACGTTAC
AGTGGTAATC GAATCCTTGC TACAGCGGCT TATAATGCGG GTCCTCATCG CGTCGATAGC
TGGAAAGGTA AAGCAGGGCA AAGCTTGGAG ATGGACAGTT GGATTGAAAC CATTCCCTAT
AAAGAAACGC GTAACTATGT AAAAAATGTA TTAGCGTATA ATGTTATCTA CCAACACATT
TTAGATCAAT CGCGAGAATT TTTTAATAAA ACAGAACTTA ATACGCGTTA TTAG
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| Protein sequence | MNKFLLLCCG FFSLTSFVAA DDLDKQRELY SQAVVLQAQG EWEQAQKTAA LIAEYPLTYL
LEFETIKAHF ATNNAAAVHA FINNNPNRSL SLDLERDYLR FLARNYAWKE FLDFYPQLPN
SEDLKCNYFQ AKINQGKTEE IWPEFKKTWL TGSSLPPACD NVIAVYRDNN TLSEKLVWQR
FSLAYQNNSP ALMRYLTTWM KGDNRVLATQ LYALYKKPES LLNSELFQSR TQASFLFLQM
SIKRLARVDL NSAMDLFNRY EKKIPFTASE SQTLKKYFAL RTLLYEVESQ LPWLDKELVS
LDDDGLFELR IRYAIKLDNW KDIEYWLNVL PERLQEKDKW IYWQARVLEN KKQQKQADKL
YLKIAGQRRY YSFLAAQKLG LDYQLNAKLV SEKSDSLKMK KADLAYIGEL AYQKHNALLK
REWYALLNNN DKNTQLQLGL YAYQKGWAHL SVMASINSKS WDALNIRFPK VKSGLFANTA
NQYQLEPTYI YALTRRESAF DEYAQSRVGA SGYMQLMPAT AKETAQMIGM KDYKNQAQLN
DGAINVQLGT AYFDMLLKRY SGNRILATAA YNAGPHRVDS WKGKAGQSLE MDSWIETIPY
KETRNYVKNV LAYNVIYQHI LDQSREFFNK TELNTRY
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