Gene Ping_0290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0290 
Symbol 
ID4624541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp377847 
End bp378923 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content40% 
IMG OID639795487 
ProductABC transporter substrate binding inner membrane protein 
Protein accessionYP_941755 
Protein GI119944075 
COG category[R] General function prediction only 
COG ID[COG4174] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATT ATATTTTAAG ACGTTTATTA CTTATTATTC CGACCTTGTT AGGCATTATG 
ACCATTAATT TTTTTATTGT GCAGATTGCC CCCGGTGGTC CCGTTGAACA AGCGATTGCA
CAATATCAGG GCATAGGCGA TGCTAATACA ACGCGTGTTG CATCAGGCAC TAACAGTGAA
ATAAAACAGG GTGGCGAAAG TAAATACAGG GGTTCCCGAG GGGTGGATCC TGAATATATT
AAAGCACTTG AAAAACTCTA TGGTTTTGAT AAACCTATTG TAGAGCGTTA CTTTTCAATG
TTATGGCGTT ATATAAAATT TGATTTTGGC GAAAGCTTTT ATCGCAATGA AAAAGTCACC
GATTTAATTA TTTCAAAAAT GCCCGTTTCA ATTTCACTGG GGCTTTGGAC GACGCTGCTG
GTCTACTTGA TTTCTATCCC ACTGGGCATT AAAAAAGCCA CCTCCCATGG TCATTCTTTT
GACATTTGGA CCAGTACTAT TGTGACCGTT GCCTATGCGC TCCCAAGTTT TATTGTCGCT
ATTATGCTGA TTGTTCTTTT TGCCGGTGGC TCTTATTATG ACTGGTTTCC TCTGCGCGGA
TTAACCTCGG ATAATTTCTC GGAATTAAGC TTGATGGCGC AAATTAAAGA TTATTTCTGG
CATCTTACCC TGCCTGTTTT TGCCTCTGTA TTGGGCAGTT TTGCAACCCT GACTATGCTT
ACTAAAAACT CTTTCCTTGA TGAAATTCAT AAACAATATG TGGTGACTGC CCGCGCCAAG
GGCTGCTCGG ATAAGCGCAT TTTGTATGGT CATGTTTTTA GAAATGCCAT GTTATTAGTC
TTGGCGGGTT TACCCGCGGC ATTGATTGGT ATTTTTTTTA CTGGTTCGAT GTTAATTGAA
GTTATTTTTT CTTTAGACGG TTTAGGTCTA TTAAGCTTTG AATCTGTTAT CAACCGGGAT
TACCCGGTGA TTTTTGCCTC GCTTTATATG TTTACTCTAG TGGGGCTGGT TTTAAAACTG
ATCAGTGATA TCACTTATAC TCTGATTGAT CCACGCATTA CTTTTGAGGG GCGTTAA
 
Protein sequence
MNYYILRRLL LIIPTLLGIM TINFFIVQIA PGGPVEQAIA QYQGIGDANT TRVASGTNSE 
IKQGGESKYR GSRGVDPEYI KALEKLYGFD KPIVERYFSM LWRYIKFDFG ESFYRNEKVT
DLIISKMPVS ISLGLWTTLL VYLISIPLGI KKATSHGHSF DIWTSTIVTV AYALPSFIVA
IMLIVLFAGG SYYDWFPLRG LTSDNFSELS LMAQIKDYFW HLTLPVFASV LGSFATLTML
TKNSFLDEIH KQYVVTARAK GCSDKRILYG HVFRNAMLLV LAGLPAALIG IFFTGSMLIE
VIFSLDGLGL LSFESVINRD YPVIFASLYM FTLVGLVLKL ISDITYTLID PRITFEGR