Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0290 |
Symbol | |
ID | 4624541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 377847 |
End bp | 378923 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639795487 |
Product | ABC transporter substrate binding inner membrane protein |
Protein accession | YP_941755 |
Protein GI | 119944075 |
COG category | [R] General function prediction only |
COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTATT ATATTTTAAG ACGTTTATTA CTTATTATTC CGACCTTGTT AGGCATTATG ACCATTAATT TTTTTATTGT GCAGATTGCC CCCGGTGGTC CCGTTGAACA AGCGATTGCA CAATATCAGG GCATAGGCGA TGCTAATACA ACGCGTGTTG CATCAGGCAC TAACAGTGAA ATAAAACAGG GTGGCGAAAG TAAATACAGG GGTTCCCGAG GGGTGGATCC TGAATATATT AAAGCACTTG AAAAACTCTA TGGTTTTGAT AAACCTATTG TAGAGCGTTA CTTTTCAATG TTATGGCGTT ATATAAAATT TGATTTTGGC GAAAGCTTTT ATCGCAATGA AAAAGTCACC GATTTAATTA TTTCAAAAAT GCCCGTTTCA ATTTCACTGG GGCTTTGGAC GACGCTGCTG GTCTACTTGA TTTCTATCCC ACTGGGCATT AAAAAAGCCA CCTCCCATGG TCATTCTTTT GACATTTGGA CCAGTACTAT TGTGACCGTT GCCTATGCGC TCCCAAGTTT TATTGTCGCT ATTATGCTGA TTGTTCTTTT TGCCGGTGGC TCTTATTATG ACTGGTTTCC TCTGCGCGGA TTAACCTCGG ATAATTTCTC GGAATTAAGC TTGATGGCGC AAATTAAAGA TTATTTCTGG CATCTTACCC TGCCTGTTTT TGCCTCTGTA TTGGGCAGTT TTGCAACCCT GACTATGCTT ACTAAAAACT CTTTCCTTGA TGAAATTCAT AAACAATATG TGGTGACTGC CCGCGCCAAG GGCTGCTCGG ATAAGCGCAT TTTGTATGGT CATGTTTTTA GAAATGCCAT GTTATTAGTC TTGGCGGGTT TACCCGCGGC ATTGATTGGT ATTTTTTTTA CTGGTTCGAT GTTAATTGAA GTTATTTTTT CTTTAGACGG TTTAGGTCTA TTAAGCTTTG AATCTGTTAT CAACCGGGAT TACCCGGTGA TTTTTGCCTC GCTTTATATG TTTACTCTAG TGGGGCTGGT TTTAAAACTG ATCAGTGATA TCACTTATAC TCTGATTGAT CCACGCATTA CTTTTGAGGG GCGTTAA
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Protein sequence | MNYYILRRLL LIIPTLLGIM TINFFIVQIA PGGPVEQAIA QYQGIGDANT TRVASGTNSE IKQGGESKYR GSRGVDPEYI KALEKLYGFD KPIVERYFSM LWRYIKFDFG ESFYRNEKVT DLIISKMPVS ISLGLWTTLL VYLISIPLGI KKATSHGHSF DIWTSTIVTV AYALPSFIVA IMLIVLFAGG SYYDWFPLRG LTSDNFSELS LMAQIKDYFW HLTLPVFASV LGSFATLTML TKNSFLDEIH KQYVVTARAK GCSDKRILYG HVFRNAMLLV LAGLPAALIG IFFTGSMLIE VIFSLDGLGL LSFESVINRD YPVIFASLYM FTLVGLVLKL ISDITYTLID PRITFEGR
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