Gene Ping_0286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0286 
Symbol 
ID4624537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp373016 
End bp374077 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content41% 
IMG OID639795483 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_941751 
Protein GI119944071 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTAAAA ATGAAAATAT TTATATAGAA TCAGAAACAG TGTTAATCAC TCCCGCAGAA 
TTAAAAGATT TAGTGCCTGC TTCAGAAGAA GTTTATCAGT TTATCGCAGA AGCCCGCCAA
ACAGTGTCGA ATATAGTGCA TAAAAAAGAT CCTCGTTTTT TGGTGATTTG CGGACCTTGT
TCTATTCATG ATATTGATGC CGCTAAAGAC TATGCGACAC GCCTAAAATC CTTACATGAG
GAATATAAGG ATACGCTTTA TATTGTTATG AGGGTCTATT TTGAAAAACC CCGCACCACA
GTTGGTTGGA AAGGGTTAAT CAATGACCCG TACATGGATG ATTCATTCGA AATTGAAACT
GGATTAAAGC AAGCTCGCGA ACTACTGCTA TGGATTTCCG AATTAGGTTT ACCTATTGCA
ACGGAAGCGC TTGATCCTAT CAGCCCGCAA TATTTAGGCG ATCTGTTTAG TTGGTCTGCA
ATTGGCGCGC GTACTACTGA GTCACAAACT CACCGCGAAA TGGCAAGTGG TTTATCAATG
CCGGTTGGTT TCAAAAATGG CACCGACGGC AGTTTATCTA CCGCTGTCAA CGCGATGAAA
TCTGCGTCTT CTCCACATCG TTTTATGGGT ATTAACCAGT TAGGCCAAAG TGCATTACTG
CAGACCTCGG GTAATCGAGA TGGACATGTT ATTTTACGTG GTGGTGGTGG TAAGCCAAAC
TATGATTCCG TCAACGTTGC ACTGGCTGAG CAGGCGCTTA AAAAAGCCAA AGTAGAAGAA
GTATTAATTG TCGACTGCAG CCATGAAAAT TCAAATAAAA ATCATACCCT GCAGCCTTTA
GTGGCAAAAG ATGTATTCCA TCAGGTGACT GAAGGAAATA AATCCATTGT CGGTATTATG
CTAGAAAGTA ATATTAATGA AGGTAATCAA GCAGCCACAT TGCCTAAAGC GTCCCTTAAA
TATGGTGTGT CAGTCACTGA TGCCTGTATT GATTGGGAAA CAACGAGTCA ACTTCTTGCT
GAAGCTGTCA ATGTATTAAA AGATACTTTA AAAACAAGAT AA
 
Protein sequence
MPKNENIYIE SETVLITPAE LKDLVPASEE VYQFIAEARQ TVSNIVHKKD PRFLVICGPC 
SIHDIDAAKD YATRLKSLHE EYKDTLYIVM RVYFEKPRTT VGWKGLINDP YMDDSFEIET
GLKQARELLL WISELGLPIA TEALDPISPQ YLGDLFSWSA IGARTTESQT HREMASGLSM
PVGFKNGTDG SLSTAVNAMK SASSPHRFMG INQLGQSALL QTSGNRDGHV ILRGGGGKPN
YDSVNVALAE QALKKAKVEE VLIVDCSHEN SNKNHTLQPL VAKDVFHQVT EGNKSIVGIM
LESNINEGNQ AATLPKASLK YGVSVTDACI DWETTSQLLA EAVNVLKDTL KTR