| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0241 |
|---|
| Symbol | |
|---|
| ID | 4625350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 309481 |
|---|
| End bp | 310512 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 639795439 |
|---|
| Product | transposase IS116/IS110/IS902 family protein |
|---|
| Protein accession | YP_941707 |
|---|
| Protein GI | 119944027 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.578488 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGAAAT CTAATATCAT CGGAATCGAT TTAGCTAAAA ATATTCTTCA AATTTGCCAT
ATCAGTAAAT ACGGTGAGTT AATCAGTAAT AAAGCAGTTA GCCGACAAAA ACTAAAACAG
ATCCTAGCGA ATCAGCAACC TGCGGTTGTT GCTATTGAAG GCTGTGGTAG TAGCCATTAT
TGGGGCCGGT ACGCAGAACA GTTTGGTCAT GATGTGCGAG TCATTAGCCC TAAAAAAGTA
AAATGTTTTT TACAAGGCCA CAAAACTGAC GCTAATGATG CTTTGGCCAT TGCAAATGCA
TCGTTACAGA TAGGGTTAAA AACAAGTAAG CCCAAAAGTG AAGAACAGCA AACTTTACAA
ACATTAGACA CAAGCCGACT GTTCCTATCA CGCAGTATTA CTGCCCTAGG CAACCATCTG
CGTGCAATGC TATATGAATA TGGCATTGTC AGTACTGTCG GTGTCAAAGG GTTAACTAAA
GCCGTACTGG AAACGCTTGA AGCTAGCTTA TTACCAGAGT GTTTACGGTC AACCGTCAAT
CAACTTTGGG TAACATATTT AAACTTAAAA ACAGAGTTAG CCCAGTTAAT CAAAACCAAA
AACGGTCTGG TTCGTCAATT ACAGCCCTGT AAAGCATTAA TGGATTTAGA AGGTGTTGCT
GAAGTATGTG CAGGTATGCT GTATTCATCA ATTGGTGATG GGAAGCAGTT TAAAAGTGGG
CGGGAGGCAT CGGCTTTTGT AGGGTTAACA CCTAAACAAC ATAGCTCAGG GGGTAAAGTA
TTTATGACAG GAATTGATCG AGCTGGCGGA ATTAAAGAAT TGAGATCGGC TTTATACCAA
GGCGCACTTT CTTATATATG CCGATTGCCA GATGAACCCA AAACGGCCAA ACAAGCATGG
TTGATAAAAC TGGTTCAACG CGCGGGTATT AAACGATCCT GTATTGCTTT GGCGAATAAA
ACAGTTAGAA CCGCCTGGGC AATGCTACGT TATGAGAATC AATATAAGCA ACAATCACTA
TTAGTAATAT AG
|
|---|
| Protein sequence | MLKSNIIGID LAKNILQICH ISKYGELISN KAVSRQKLKQ ILANQQPAVV AIEGCGSSHY
WGRYAEQFGH DVRVISPKKV KCFLQGHKTD ANDALAIANA SLQIGLKTSK PKSEEQQTLQ
TLDTSRLFLS RSITALGNHL RAMLYEYGIV STVGVKGLTK AVLETLEASL LPECLRSTVN
QLWVTYLNLK TELAQLIKTK NGLVRQLQPC KALMDLEGVA EVCAGMLYSS IGDGKQFKSG
REASAFVGLT PKQHSSGGKV FMTGIDRAGG IKELRSALYQ GALSYICRLP DEPKTAKQAW
LIKLVQRAGI KRSCIALANK TVRTAWAMLR YENQYKQQSL LVI
|
|---|
| |