Gene Ping_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0224 
Symbol 
ID4627165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp282480 
End bp283931 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content46% 
IMG OID639795416 
Productxylulokinase 
Protein accessionYP_941690 
Protein GI119944010 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID[TIGR01312] D-xylulose kinase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATTG GTATTGATCT TGGAACGTCT GGAGTAAAAG TCATTTTAGT TGATCAAAGT 
GGACTTATTT TAGGAACAAA AACTGTCTCA ATATCGGTGT CACGACCTGC ACCACTATGG
TCAGAGCAGG ATCCGGCAGA ATGGTGGAGC GCAACCAATC AAGCAATTAA AGCACTCGCC
AAAGATATCA GCTTATCTAA TGTTAGTGCG ATTGGATTAG CAGGACAAAT GCACGGTGCT
GCATTACTGG ATGACAATGG CAAAGTCCTT CGTCCTGCTA TTTTATGGAA TGATGGACGA
TGCGCGGAAG AATGCCTCGA AATGGAGCAG TTAGTACCAA CAAGCAGGGA TATTACCGGC
AATATTATGA TGCCGGGATT TACCGCCCCT AAATTAAAAT GGGTACAAAA AAACGAGCCG
GAATGCTTCG CTAAGATAGC GAAGGTATTA CTGCCAAAAG ATTATCTGCG CTACTGCATG
ACGGGAGATT TTGCATCCGA CATGTCGGAT GCGGCAGGCA CTATGTGGCT TGATGTGGCA
AAACGGGATT GGAATGCTCA ACTACTAGCG GCAACAGGGT TAACCCGTCA GCAAATGCCT
AAATTATATG AAGGTAGCCA AATCACAGGC ACCTTATCAA AAGAGCTTGC TAATGAATGG
GGGATGCCTT GTGTCCCCGT CGTTGCAGGG GCTGGTGATA ATGCTGCGGG CGCAATTGGA
GTGGGTATTA CCCAGCCCAG ACAAGCGATG CTTTCACTTG GAACATCCGG GGTATATTTT
GCCGTTAGTG ATGGTTTCAG CGCAAACCCA GAATCAGCAT TACATAGCTT CTGCCATGCC
TTACCAGCAA CATGGCACAC AATGTCCGTG ATATTAAGTG CCGCTTCTTG TTTAACCTGG
GTCGCAGAAT TAACGGGAGC ATCAAGTGTT CCTGAGATGA TTGCCGAGGT TGAAGCGGAT
GCTGATCTAA ATTCAGAAGT GATTTTTCTT CCTTATCTGT CTGGAGAGCG TACACCGCAT
AACAACCCTG ATGCTAAAGG TGTATTTTTT GGTATGACAC ACGCGACTAA ACGTGCAGAG
TTAGCTCAAG CCGTCTTAGA AGGGGTTGGT TTTGCTTTAG CTGATGGCTT AGATGCACTC
CATGCAACAG GCGTCGAGCC GGAAGAGATT TCATTAATTG GTGGCGGCGC ACAAAGTGCT
TATTGGCGCC AAATGTTAGC TGATATTTTC AATAAAAAGC TCGCTTATCG AGTTGGTGGG
GATGTGGGAC CCGCATTAGG TGCTGCGCGA CTTGCTCGCC TAGGGTTAGC AGGACAAGAA
AAACTTTCAG AAGTTTGCCC CGTTCCAAGA CTGATTCAAA CTCATCTTCC CAATATTGGA
AAGCATGCGG CTTATGCACT GAAGCGCGAA AAATTTCAAA AAATTTATGT CCAATTAAAG
GATATTTTTT AA
 
Protein sequence
MFIGIDLGTS GVKVILVDQS GLILGTKTVS ISVSRPAPLW SEQDPAEWWS ATNQAIKALA 
KDISLSNVSA IGLAGQMHGA ALLDDNGKVL RPAILWNDGR CAEECLEMEQ LVPTSRDITG
NIMMPGFTAP KLKWVQKNEP ECFAKIAKVL LPKDYLRYCM TGDFASDMSD AAGTMWLDVA
KRDWNAQLLA ATGLTRQQMP KLYEGSQITG TLSKELANEW GMPCVPVVAG AGDNAAGAIG
VGITQPRQAM LSLGTSGVYF AVSDGFSANP ESALHSFCHA LPATWHTMSV ILSAASCLTW
VAELTGASSV PEMIAEVEAD ADLNSEVIFL PYLSGERTPH NNPDAKGVFF GMTHATKRAE
LAQAVLEGVG FALADGLDAL HATGVEPEEI SLIGGGAQSA YWRQMLADIF NKKLAYRVGG
DVGPALGAAR LARLGLAGQE KLSEVCPVPR LIQTHLPNIG KHAAYALKRE KFQKIYVQLK
DIF