| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0223 |
|---|
| Symbol | |
|---|
| ID | 4627164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | - |
|---|
| Start bp | 281415 |
|---|
| End bp | 282098 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639795415 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_941689 |
|---|
| Protein GI | 119944009 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTATC AAACGGTATT TATTACTGGT GCTACAAAGG GCCTAGGTCG AGCACTAGTA
ATAGATCTTT GCAGCAAAGG ATATAAAGTC TTTGCAACCG GACGTGATGA AACTCAGCTG
CAGCAACTTA TGCAGCAAAC AGGCTGCTTA GGGGTCAGTT GCGACCTCAG CCAAGCAGAA
GCTGCAGTTG AAATTTTTCA GAAAGCCACA AAAGCGCTGG GCCATATTGA TGTGCTTATT
AATAATGCCG GCATGAATTC ACGAAAATGC GAATTAGCCG AGACAACATT AGAAGAGTTT
GAACAACAGT ATGCAGTCAA TTTACGTGCG CCTTATTTAC TTTGCCGGGA AGCAATGCAG
CAGATGTTAC CTAAAGAGCA TGGTTATATT ATCAATATTG TCAGTACGGC AGCTAAACGC
AGTAATCCAA CCATGAGTAT TTATAGCGCA ATGAAACAGG GATTTGCCGG GTTGAATAAT
GTCTTAATGA AAGAAGCACA GCCCCATGGT ATCAAAGTAA CTGCCGTTTA CCCCGGAGGA
ATGAATACCG CCTTCCGCGA GCAGGAACGT CCGCAATATA TGCAGCCTGC GAGCGTAGCA
ACACTGGTTA GCCAATTACT CAGCAATCCC ATCGATGTCG TGATCCATGA ATTGACTTGC
CGTCCTATGG TTGAGCTGGA ATAG
|
|---|
| Protein sequence | MNYQTVFITG ATKGLGRALV IDLCSKGYKV FATGRDETQL QQLMQQTGCL GVSCDLSQAE
AAVEIFQKAT KALGHIDVLI NNAGMNSRKC ELAETTLEEF EQQYAVNLRA PYLLCREAMQ
QMLPKEHGYI INIVSTAAKR SNPTMSIYSA MKQGFAGLNN VLMKEAQPHG IKVTAVYPGG
MNTAFREQER PQYMQPASVA TLVSQLLSNP IDVVIHELTC RPMVELE
|
|---|
| |