| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0221 |
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| Symbol | |
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| ID | 4627162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 276412 |
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| End bp | 278772 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639795413 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_941687 |
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| Protein GI | 119944007 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAA TTTTAAAATC TCGCAAGATA GATCAAACCA GCCTGGGTCG CTGCATGTTA
ATTTTTATGA CGGGGTTATT AGTCAGTATT GGAACATTAT TTTGGTGGGG AGCATATAGC
CAGCTCGCCA CAAGCTTCGA TGCTTTTGAC GTTAGCTATT ATGAAAACGA ATTAAAAAGA
GTTGCCGGAG TGCTAAAACA GAATCAACTC TCATTCGAAC TGCAAATAAA AGACTATGCC
CATTGGGATG ATACAGAAGC ATTCGTATCA GGCGACTATC CTGTTTATAT AGAAGAAAAC
TTTACCCCAA TATCGCTCGC GAACAATAAG ATCAGCGGCT ATCTTATTGC CAGACTGGAT
GGCTCCTTTG CGGCTCCCCC CATGATACTT TCCGATGATG CTCTTATTCC CATGCCCGCA
AAGATGAGAT CGGTATTGTC TCCTTTGTTA CCAGCTTTAA TGACTGCCGA TAAACCGACA
GCCAACACGG CGCTATTTTG GCTTAATGAT CAAGCCACTT TTGTTTCTGG CGTGACCATC
ACAGATTCTA ATGAATCAAG ACCCCCAAGC GGTTATCTGT TGTTTTTTCG TCATTTTGAT
AGCGCTATAT TAGATGGATT CAGATCTTTA ACCTCGGTCG ATTTTACTTT ACTGCCGCAG
CTTGAAAACA ATAAAGCAAA CTTTAAGGTG CAGTATTTAT CAGACTTGGA CGAGCCAGCC
TGGGTAGTCA GCAAAAACCT GAAAAATTTA CCCGCTATGA TTGAAATACA GGGGACAACA
CATTTAAAAA AAGAACGTTA CATGAGCTTT GTATTATTGG GGAGCAGTGT TGCGGGCTTG
ACACTCTTTT CATTGCTGGG TATTTATCTA TGCCTTCATT TTAGGATTCT AAAAAGGCTG
CATATTTTTT CTCAGCTTGC GGATAAGCAT CGATTGTCAC CACAACAGCC TGTACGTTGG
CCGATTAAAA ATAACGATGA ACTTGATAAT CTTGCTTTTG CTTTGAATGA GTTAATGTCT
GAAGTGGAAG TGAGGCATAA AGAGATGAGT TTTCTTGCAG ACCATGATCC CCTTACGGGA
TTAGGTAACC GACGCTTATT GATGGCACAA CTCGATGCCA ATATAAACCG GCAGAAACGC
CATCCAACTT TTATCAGTAC TCTTTTACTT ATTGATCTCG ATGAATTCAA ATTACTCAAT
GATGGACTGG GACACAATGC GGGAGACGAT ATTCTTAAAC TTATGTCCCT GCGCATGCTC
TCACAAGTAC GCAATTACGA TACGGTTGTT CGCTTAGGCG GTGATGAGTT CGCTATCCTG
CTCGATGGCG TTGGACTGGA GATGGCACAA TCTTTTGCCG AGCGACTGCT GGACACAATC
ACTCAGCCCT TCAAACAAAA CGGTCAAGAC TTGATCTTAA GGGCTTCGAT CGGGCTAACG
GCAGTCAATA ATGGCCTCTG CAAAGAAAAT CTGATCAGAT ATGCTGATTT AGCGATGTAC
GAAGCTAAAC GACGTGGTAA GGGACAAGTG ACCATTTTTA AAATGGCTCT GCTCGATACG
GTTTCCCGCC GGGTGCTGTT AGAACAGGCA CTCCATTCCG CACTTAATGA TGATCAGCTT
GAAGTGTGGT TTCAACCGAT AGTTGATTTG AACAGCGGGG AGGTGGTAAA TATGGAGGCG
CTATCACGCT GGTCACTTGC CGGAGAATTT GTGCCACCGG AAGAGTTTAT TAATATTGCT
GAAATAACAG GAATGATTAT ACCACTGGGG CAACAATTAT TCGACAAGGT GGGCTGCGCT
CTGCAGGAGT TACGGGTAGA ACATCCGAAT CTTCAATGCA ATATTAACCT ATCGGTCAAA
CAATTCAGGG ATAGGAATTT ATTTACCGAG ATCACCTCCT GCCTAAATAA ATATCAGTTG
CCCACGTCGG CTTTCCATTT AGAGCTGACC GAAAGTATGG TAGTGGAGAC GGAAACAGAT
ATTTTACCTA TGATGCAAAA ACTGGTTGAG CATGGTTTAA AATTTCACTT AGATGACTTT
GGCACAGGAT ATTCTTCGCT CGATCGTCTC AATAATCTGC CTTTTGATAC GCTAAAAATC
GATCGCAGCT TTGTGACTTC GCTAGGCATG GGTGATGATA TTATGGCTAG AAATATTATC
AACATAGGCA ACGAATTGGG TCTGAATATT ATTGCAGAAG GCGTCGAGAC CCAAGTCGAG
CTGGATAGAT TAATGGATTT AGGCTGCTCC CAGATTCAAG GTTATTATTT TGCTAAACCT
ATGCCCTTAA GCGAGCTCAA AGACTGGCTG TATGACAAAC AGCATCAGGT GATACAAATG
AAATCAAAAC GACAAGCCTA G
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| Protein sequence | MDRILKSRKI DQTSLGRCML IFMTGLLVSI GTLFWWGAYS QLATSFDAFD VSYYENELKR
VAGVLKQNQL SFELQIKDYA HWDDTEAFVS GDYPVYIEEN FTPISLANNK ISGYLIARLD
GSFAAPPMIL SDDALIPMPA KMRSVLSPLL PALMTADKPT ANTALFWLND QATFVSGVTI
TDSNESRPPS GYLLFFRHFD SAILDGFRSL TSVDFTLLPQ LENNKANFKV QYLSDLDEPA
WVVSKNLKNL PAMIEIQGTT HLKKERYMSF VLLGSSVAGL TLFSLLGIYL CLHFRILKRL
HIFSQLADKH RLSPQQPVRW PIKNNDELDN LAFALNELMS EVEVRHKEMS FLADHDPLTG
LGNRRLLMAQ LDANINRQKR HPTFISTLLL IDLDEFKLLN DGLGHNAGDD ILKLMSLRML
SQVRNYDTVV RLGGDEFAIL LDGVGLEMAQ SFAERLLDTI TQPFKQNGQD LILRASIGLT
AVNNGLCKEN LIRYADLAMY EAKRRGKGQV TIFKMALLDT VSRRVLLEQA LHSALNDDQL
EVWFQPIVDL NSGEVVNMEA LSRWSLAGEF VPPEEFINIA EITGMIIPLG QQLFDKVGCA
LQELRVEHPN LQCNINLSVK QFRDRNLFTE ITSCLNKYQL PTSAFHLELT ESMVVETETD
ILPMMQKLVE HGLKFHLDDF GTGYSSLDRL NNLPFDTLKI DRSFVTSLGM GDDIMARNII
NIGNELGLNI IAEGVETQVE LDRLMDLGCS QIQGYYFAKP MPLSELKDWL YDKQHQVIQM
KSKRQA
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