| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0198 |
|---|
| Symbol | |
|---|
| ID | 4627081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 249992 |
|---|
| End bp | 250513 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 639795388 |
|---|
| Product | protoporphyrinogen oxidase |
|---|
| Protein accession | YP_941665 |
|---|
| Protein GI | 119943985 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG4635] Flavodoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAATTA AGACCCTTAT ATTATATTCA TCCGTTGATG GACAAACACT GAAAATTATA
AACCGGATCA TTGAGTTAGT TGAAGGTGAA GTGACCTTGG TGAATATTGA TGACAAGCCA
ATAATCGACT TTAGTCTTTA CAATAAAGTG TTAATTGGCG CCTCGGTTCG TTATGGCAAC
TTCCGCAAAA ATTTACTGAA TTTTGTTAAT CAGCATAAAA CTGAACTGGA TTCATTACCC
AATGCATTCT TTGTGGTCTG TTTAACAGCG CGTAAGCCGG AAAAAGCGAT CCCGGCCAAT
AATGCCTATA TGAACAAGTT TGATCAATTA TCTCAATGGC AGCCGCGTTT AAAAGGCGTC
TTTGCCGGTG CTCTGCTCTA TTCTCGTTAT AACTGGTGGC AAACCTTGCT TATCCAAATG
ATTATGAAAA TGACCGGAGG CAGTACCGAT AGCAGTCGGG ATATTGAATT AACGGATTGG
TCCAAGGTCG ATATTTTCAG TCAAGATTTT TCTGCTTTAT AA
|
|---|
| Protein sequence | MTIKTLILYS SVDGQTLKII NRIIELVEGE VTLVNIDDKP IIDFSLYNKV LIGASVRYGN
FRKNLLNFVN QHKTELDSLP NAFFVVCLTA RKPEKAIPAN NAYMNKFDQL SQWQPRLKGV
FAGALLYSRY NWWQTLLIQM IMKMTGGSTD SSRDIELTDW SKVDIFSQDF SAL
|
|---|
| |