Gene Ping_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0190 
Symbol 
ID4626835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp240754 
End bp241767 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content39% 
IMG OID639795380 
ProductO-succinylbenzoate-CoA synthase 
Protein accessionYP_941657 
Protein GI119943977 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1441] O-succinylbenzoate synthase 
TIGRFAM ID[TIGR01927] o-succinylbenzoic acid (OSB) synthetase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACAAG GGATTAATAA ACCCATATTT CAACAGGCTA AACTATTTCG CTATCAACTT 
CCCTTTAAAA TACCGATTGT CTTTAAAGGG ATTAAGCTCA CCGCTCGCGA GGGAGTGATC
CTGCAGGTAC AAAATGATAA GGGTGAGTTT AATTTTGCTG AAATCGCACC TTTACCCGGT
TTTAGCAAGG AGACTCTGCA ACAGGCGACA GCACAAATAA TAGCGCTGCT AAACACCCCT
CCGTTAAACA GCCAAAGCGA TATCCTGTTA TACCCCAGTG TGGCATTTGC ACTTGACTGT
ATTTTACACA ACATACCCAT CTCAGAATTA TTTAAAACAG CGGAAAGCAT CCCGCTATTG
CAGGGTGATA ACCACAGTGT GCTTAAACAG TATCTGCAAT TAAATAAGCC CAATAGCGTC
AAATTAAAAA TAGGCAGGCA ATCCGTTGCG AAGGATATAA CCCTATTTTC AGCATTAAGT
GCCCTCAATA ATAATTTATT GATACGTTGT GATGCAAATC AGAGCTGGAC TTTTGCGCAA
GCAGATCTGT TTTTTGCCAA TATTAATACT CAATTGATTG ATTATATTGA GGAGCCAACA
GCAAGCTTAA GCGATAATAT CAACCTGGCT GAGCGTTACG AGGTGCAGCT TGCTTTGGAT
GAAACCCTAC AGCAAAAGCA GTTCCAGTAT CAGCACCATC GATGTTTCAA GGCTCTGATT
TTAAAACCGA CACTGATCGG CTCCTTTGAG CGCCTAAATT ATTTTATAAA AACAGCCAAA
AAATTTCATC TAAGTGTCAG TATCAGCTCC TCATTTGAAT CGCCGCTGGG TTTAAGTCAA
TTAGCTTTTC TTGCCAGCCA ATGGTCAAAA GAGGTCGATA TTTCCTGCGG ATTGGATACG
CTAAAATTTT TTGAAAGTGC CATCTTAAAT AAAAATTCAG ATAAAAAGTT AGATAATAAA
ACACCTATTA ATCAACAAGT TAAACATTTG GAGTGTCTAT GGACAAGCAA CTGA
 
Protein sequence
MQQGINKPIF QQAKLFRYQL PFKIPIVFKG IKLTAREGVI LQVQNDKGEF NFAEIAPLPG 
FSKETLQQAT AQIIALLNTP PLNSQSDILL YPSVAFALDC ILHNIPISEL FKTAESIPLL
QGDNHSVLKQ YLQLNKPNSV KLKIGRQSVA KDITLFSALS ALNNNLLIRC DANQSWTFAQ
ADLFFANINT QLIDYIEEPT ASLSDNINLA ERYEVQLALD ETLQQKQFQY QHHRCFKALI
LKPTLIGSFE RLNYFIKTAK KFHLSVSISS SFESPLGLSQ LAFLASQWSK EVDISCGLDT
LKFFESAILN KNSDKKLDNK TPINQQVKHL ECLWTSN