| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0177 |
|---|
| Symbol | |
|---|
| ID | 4626822 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 225135 |
|---|
| End bp | 226889 |
|---|
| Gene Length | 1755 bp |
|---|
| Protein Length | 584 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639795367 |
|---|
| Product | general secretion pathway ATPase protein |
|---|
| Protein accession | YP_941644 |
|---|
| Protein GI | 119943964 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAAG ATTTTTTCTC TTTAAAAGAG CAACCCTTTT CGATCTCGCC TGATCCCGAT
TTTTTATTTT TGAGCAACCG TCATCAAGAG GCAATAGCCC ATTTGCAATA TGGTGTTCAA
GGTAACGGCG GGTTCGTCTT ATTAACTGGT GAAGTGGGTA CGGGAAAAAC CACTGTCTGC
CGTAAATTAT TGCAGGAGAT CGGTGCAACC ACCGATATCG CTTTTATTTT AAACCCGGCT
TTAACTGATA TTGAATTGCT GGCCACTGTC TGTGATGAAT TTCATATTGA TTATGAAAAA
GATAAGATCA GTTTAAAATT ATTATTTGAC AGCTTAACCG CTTGGATGAT GAATAACCAT
CATCAAGGAC GGAGTGCGAT TGTATTAATT GATGAAGCAC AACATCTTAG CTTCTCGGTA
TTAGAGCAAC TCCGTTTGCT CACCAATATT GAATCCAATA ATAAAAAACC ATTACAGGTC
ATTTTAATTG GCCAAACCGA GTTACAGCAA AAACTGAAGC AGCCTGAGTT GCGCCAATTG
GCACAGCGAA TTAGCGCACG TTACCATCTG ATGCCTTTGA CGGAGCAGGA AAGCGTCTAT
TATATCCAGC ATCGATTGAA TGTTGCGGGG GTAAGTTTTC CGATTTTTGA ACACCGGGCA
GTAAGAGAAG TTTTTAAGCG CAGTCAGGGA GTCCCGCGCT TAATTAATTT ACTTTGTGAT
CGTAGCCTGC TCTGTGCATA CACTCAAAAT TCATTAAAAG TGACGGTGTT GATGGTAAAA
AAAGCGAGTG ATGAGATGGC GCTTTCACCA CCTCAAACAC TTTTTAATGC GATCTTCAAA
AGCAGTTGGC GATTTATTGC TTTGAGCCTA TTGGCTGTCT TCACTGCTTT TCAGGCTCCT
GAACTGTTGA ACCGCTTTAA AGAGGTCAAA GCACAACCGG CAGAATTAAT CATACCAGCT
ATAGCTGCCA CATTAGGTGA GTCTCTGCCA GAACTGATCG TGCCTCCGGA AGAACATATT
ACGCCTCTGC CAGAAAATAT TGTGCCTCCC GAAGAGCTCA TCGCGCCTCC CGCAGAATAT
ACTGTGCCAA CCGAATTGGA ACAAGCCACC GAGGTTGGAG TATTACAGAA GAATGAATCT
CCTGACTGGT TTGATAATTA TGAGTTATTA GATATTTCCA ATGCAACCTT TGCTAATGCC
CTATTAAATT TATATGCTGT TTGGGGGTAT CAGGTTGATC CCGAAACGGT TAATTGTGAA
CAGGGAAAAA GTGTGTTGTT ATCCTGTTAT TCGGAAAATA CCAGCCTGAA AAAATTAAAG
CAGTTGAATT ACCCCAGTGT GGTTAGACTT GAAAGGGATA ATTTAGAAAG TTTACATGCG
GTGCTTTATG CCATTAATGA CAGCTACCAA TTATTGATTG ACGGGCAAGT TATTGAGGTG
TCAGAAACCT GGTTTAACAC CTACTGGTCA GGGGAGCTAA CGGTACTTTG GCAGGCACCC
TTTGAATTAC AGGGTAACCT TAAATTTGGC CAGCAAAGTG AGCAAATAGC CTGGCTGGCG
AGGCAACTTA ATAAGTTGCA GGGAATGCCG ATTGAGAGTA AAAATCGCTT CGATTTGCCA
TTATTACAGC AAGTGATGCG TTTTCAGATA GAAAATGGCT TAAAAGATGA TGGTATTGTG
GGCGAGCGAA CCTTAATACC ACTAATGCAA ATAGTTAATT CTCAGTTGCC ACGACTACAA
CAGGAAGTAA ATTAA
|
|---|
| Protein sequence | MYQDFFSLKE QPFSISPDPD FLFLSNRHQE AIAHLQYGVQ GNGGFVLLTG EVGTGKTTVC
RKLLQEIGAT TDIAFILNPA LTDIELLATV CDEFHIDYEK DKISLKLLFD SLTAWMMNNH
HQGRSAIVLI DEAQHLSFSV LEQLRLLTNI ESNNKKPLQV ILIGQTELQQ KLKQPELRQL
AQRISARYHL MPLTEQESVY YIQHRLNVAG VSFPIFEHRA VREVFKRSQG VPRLINLLCD
RSLLCAYTQN SLKVTVLMVK KASDEMALSP PQTLFNAIFK SSWRFIALSL LAVFTAFQAP
ELLNRFKEVK AQPAELIIPA IAATLGESLP ELIVPPEEHI TPLPENIVPP EELIAPPAEY
TVPTELEQAT EVGVLQKNES PDWFDNYELL DISNATFANA LLNLYAVWGY QVDPETVNCE
QGKSVLLSCY SENTSLKKLK QLNYPSVVRL ERDNLESLHA VLYAINDSYQ LLIDGQVIEV
SETWFNTYWS GELTVLWQAP FELQGNLKFG QQSEQIAWLA RQLNKLQGMP IESKNRFDLP
LLQQVMRFQI ENGLKDDGIV GERTLIPLMQ IVNSQLPRLQ QEVN
|
|---|
| |