Gene Ping_0173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0173 
Symbol 
ID4623955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp221555 
End bp222049 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content39% 
IMG OID639795363 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_941640 
Protein GI119943960 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCG TTTTTATTGG CGTCGGCTCC AGTATCAACC GATCTGAGAA TATTCGTTTA 
GGTATTGCGG CATTACAAGC TGAGTTTGGT GAGTTACTGC TTTCTCCTCT TTACGAAAGT
GAAGCTGTTG GTTTTTCAGG GGTTAATTTT TACAATTTAG TGGTTAAATT GCATACTGAG
CAAAATATTG TCGAATTAAT TAAAAAACTT AAAGGCATAG AGAAGCAGCA TGGCCGCCCG
GAAAAGTCAT CTAAGTTTAC CCCAAGAACC TTAGATTTAG ATTTACTTTT ATACGACCAG
CAGATAGATC CTGATATTGA TTTACCGCGC GGCGAAATTT TAAAAAATGC ATTTGTATTA
AAACCCTTAT CCGAGTTAGC ACCAACATTA AGACACCCTG TTCTGGGTGA AACCTATCAA
GCCTTGTGGC GGAATTATCC GCAACAAAAG CAAAAATTGT GGAAAGTATC AAAACAGCTT
CCCGATCATT ATTGA
 
Protein sequence
MAAVFIGVGS SINRSENIRL GIAALQAEFG ELLLSPLYES EAVGFSGVNF YNLVVKLHTE 
QNIVELIKKL KGIEKQHGRP EKSSKFTPRT LDLDLLLYDQ QIDPDIDLPR GEILKNAFVL
KPLSELAPTL RHPVLGETYQ ALWRNYPQQK QKLWKVSKQL PDHY