Gene Ping_0168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0168 
Symbol 
ID4623950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp218355 
End bp219356 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content42% 
IMG OID639795358 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_941635 
Protein GI119943955 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAC CAATAGTTTT AAGCGGTTGC CAGCCTTCGG GATCGTTAAC CATAGGCAAC 
TATATGGGCG CGTTGCGTCA ATGGGTTGAG ATGCAGAAAA CCCATGACTG CCTTTTTTGT
CTGGTTGATT TACATGCGAT TACTGTTCGC CAGGATCCAC AAGCACTGCG CAAAGCAATT
TATGATGGTT TAGCTATGTA TCAGGCTGTG GGTATTGATC CACAAAAAAG TACTATGTTT
ATTCAGTCAC AAGTGACGGA ACATGCAGAA CTTGCATGGA TATTAAACTG TTATACGCAG
ATGGGTGAGT TAAACCGTAT GACCCAGTTT AAGGATAAAT CACAAAAGAA TATTACTAAT
ATTAATGTGG GATTATTCAG TTACCCGGTA TTGATGGCTG CCGATATTCT TATTTATGGG
CCTAAACATG TGCCTGTGGG CAGTGATCAA AAACAGCATC TTGAATTAGC ACGTGATATT
GCGATCCGTT TCAATAATGC CTATGGTGAT ACTTTTGTGG TGCCTGAGCC TGCTATTCCT
GAACATGGAG CACGTATTAT GAGCCTGCAG GAGCCAACTA AGAAAATGTC AAAGTCCGAT
GATAATGTTA AAAACTTTAT TGGTTTGCTG GAAGATCCAA AAAAGATTTT GAAGAAAATT
AAAAGTGCGG AGACAGACTC TGATCAGCAG GCGCGTATCT ATTTTGATCC TGTTGAAAAG
CCGGGTATTT CAAATTTACT CACCTTGCTT TCCTGCTCGA CGGGTAAGTC TATTGAAAGC
CTGATCCCTG AATATGAAGA TAAAATGTAT GGTCATCTAA AGAGCGATAC TGCAGACGCC
GTAGTGAATC TCTTAGAACC AATTCAAGCC CGCTTTAAAG AGTTGCGGAA AGATGAGACT
GCATTACAAG CGATTGCGCG TGCCGGTGCA CAGAAGGCGC GTGTACGTGC TGCTGATACA
TTAGCGAAGG TTTACGATAA AGTCGGTTTT TTACCAAAAT AG
 
Protein sequence
MTKPIVLSGC QPSGSLTIGN YMGALRQWVE MQKTHDCLFC LVDLHAITVR QDPQALRKAI 
YDGLAMYQAV GIDPQKSTMF IQSQVTEHAE LAWILNCYTQ MGELNRMTQF KDKSQKNITN
INVGLFSYPV LMAADILIYG PKHVPVGSDQ KQHLELARDI AIRFNNAYGD TFVVPEPAIP
EHGARIMSLQ EPTKKMSKSD DNVKNFIGLL EDPKKILKKI KSAETDSDQQ ARIYFDPVEK
PGISNLLTLL SCSTGKSIES LIPEYEDKMY GHLKSDTADA VVNLLEPIQA RFKELRKDET
ALQAIARAGA QKARVRAADT LAKVYDKVGF LPK