Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0167 |
Symbol | |
ID | 4626297 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 217676 |
End bp | 218344 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639795357 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_941634 |
Protein GI | 119943954 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGATT ATTTAATTGC CCCTTCAATC CTTTCTGCTG ATTTTGCACG GTTGGGGGAA GATGTTGAAA AAGTATTAGA CGCTGGTGCT GATGTAGTGC ATTTTGACGT AATGGATAAT CACTACGTGC CTAATTTAAC CATTGGTCCG ATGGTTTGTA AGGCCTTACG AGACTATGGT ATTACAGCGC CAATCGATGT ACATCTTATG GTAAAACCGG TCGATACTAT GATAGTTGAG TTTGCAAAAG CAGGCGCATC GATTATTACC TTTCATCCTG AAGCCTCTGA TCATGTGGAT CGCTCCTTAC AGTTAATTAA AGAACATGGT TGTAAAGCGG GTTTAGTGTT AAATCCAGCT ACTTCATTAG AAGTATTAAC CCATGTTATG GATAAACTCG ACGTGGTGTT ATTAATGTCG GTAAATCCAG GTTTTGGTGG CCAATCATTT ATTCCGCACA CCCTTGAAAA ATTACGTCAG GTCAAAAAAT TGATCACTAC CAGCGGCCGC GATATTCGTT TACAGGTTGA TGGTGGTGTT AAAACTGACA ATATTAAAGA AATCGCAGAG GCAGGTGCAG ATATGTTTGT GTCTGGCTCC GCCATTTTTA ATCAGCCTGA TTATAAGGTT GTCATTGATA AAATGCGCGG TGAGTTAGCT AATATTTAA
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Protein sequence | MTDYLIAPSI LSADFARLGE DVEKVLDAGA DVVHFDVMDN HYVPNLTIGP MVCKALRDYG ITAPIDVHLM VKPVDTMIVE FAKAGASIIT FHPEASDHVD RSLQLIKEHG CKAGLVLNPA TSLEVLTHVM DKLDVVLLMS VNPGFGGQSF IPHTLEKLRQ VKKLITTSGR DIRLQVDGGV KTDNIKEIAE AGADMFVSGS AIFNQPDYKV VIDKMRGELA NI
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