Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0163 |
Symbol | |
ID | 4626293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 213919 |
End bp | 214434 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639795353 |
Product | shikimate kinase |
Protein accession | YP_941630 |
Protein GI | 119943950 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0703] Shikimate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.919882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGAAC AACGTAATAT TTTCTTAATT GGCCCAATGG GCGCCGGCAA AAGCACAATT GGTCGTCATT TAGCACAAAT GTTACACCTT GATTTTCTTG ATTCTGATGC AGAGATTGAG AAAAAAACGG GTGCAGACAT TGCGTGGGTT TTTGATGTAG AGGGCGAAGA GGGTTTCCGT AATCGCGAAC AAAGCATGAT TGATGAGCTG ACACAAAAGC ATGGTATCGT TTTAGCAACA GGTGGCGGAG CACTTATTCG CCCTGAAAAT AGGATACATT TGTCGGCACG AGGTATTGTT GTTTACTTAA AAACCAGTGT AAATAAACAG TTAGCCCGGA CATTAAAAGA TAAACGCCGT CCCTTATTAC AAACAGATGA TCCACGAACG GTATTAGAAG CATTAGCTGA AAAACGTAAT GAGTTTTATG ATGAAGTAGC TGATTATACG ATGGAAACAG ATGAGCAAAG CGCGAAGGTT GTCGCTAGTC AAATCATTGC ATTATTGGAT TTCTAA
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Protein sequence | MAEQRNIFLI GPMGAGKSTI GRHLAQMLHL DFLDSDAEIE KKTGADIAWV FDVEGEEGFR NREQSMIDEL TQKHGIVLAT GGGALIRPEN RIHLSARGIV VYLKTSVNKQ LARTLKDKRR PLLQTDDPRT VLEALAEKRN EFYDEVADYT METDEQSAKV VASQIIALLD F
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