Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0159 |
Symbol | |
ID | 4626289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 210001 |
End bp | 210558 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639795349 |
Product | fimbrial assembly family protein |
Protein accession | YP_941626 |
Protein GI | 119943946 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3166] Tfp pilus assembly protein PilN |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.519903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAATA TTAATTTATT GCCATGGCGG GATGAGCTTA AAAAGAAAAA GAAAAAAATG TTTTTGATTT TTTTAGGTTT AAGTTCTATT TTGATCCTGG GAGTGTCTTA TTTAGGGAAG TTATATGTTG ATGCCTTAAT TGGCGCACAA AACCAGCGTA ATGAATACTT GCAGGTCCAA AATACCATCC TGGACAGGCG CATTGCAGAT GTGCGTCAAA TCAAAAAAGA AAAGGAGGAG CTTGAACGCC GTATTCTTCT CATTCAAAAA TTAGAAGAGA AGCGCAATTA TGCAACGCAT CTCTTTAATA TCTTGCCGCA AGTTGTCCCA ACAGGTATTT ATTTGAATAG TATCACATTT GCCAACGAAC AAGTTGATGT TAGGGGGATG AGTGAGTCGA ATAATCGCCT TGCTGAAATG ACCCGAAATA TTGATAATTC TGGTTGGTTG GGAGAAGCTT ATATTAGCTC TATCATTTCT GGACCGACCG AACCTATAAA ACTAAGTCAG TTCGTAATGA AATTTGTTGT CATTCCTGAA AGAAAAGGGG GAGAGTGA
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Protein sequence | MSNINLLPWR DELKKKKKKM FLIFLGLSSI LILGVSYLGK LYVDALIGAQ NQRNEYLQVQ NTILDRRIAD VRQIKKEKEE LERRILLIQK LEEKRNYATH LFNILPQVVP TGIYLNSITF ANEQVDVRGM SESNNRLAEM TRNIDNSGWL GEAYISSIIS GPTEPIKLSQ FVMKFVVIPE RKGGE
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