Gene Ping_0159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0159 
Symbol 
ID4626289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp210001 
End bp210558 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content38% 
IMG OID639795349 
Productfimbrial assembly family protein 
Protein accessionYP_941626 
Protein GI119943946 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3166] Tfp pilus assembly protein PilN 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.519903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATA TTAATTTATT GCCATGGCGG GATGAGCTTA AAAAGAAAAA GAAAAAAATG 
TTTTTGATTT TTTTAGGTTT AAGTTCTATT TTGATCCTGG GAGTGTCTTA TTTAGGGAAG
TTATATGTTG ATGCCTTAAT TGGCGCACAA AACCAGCGTA ATGAATACTT GCAGGTCCAA
AATACCATCC TGGACAGGCG CATTGCAGAT GTGCGTCAAA TCAAAAAAGA AAAGGAGGAG
CTTGAACGCC GTATTCTTCT CATTCAAAAA TTAGAAGAGA AGCGCAATTA TGCAACGCAT
CTCTTTAATA TCTTGCCGCA AGTTGTCCCA ACAGGTATTT ATTTGAATAG TATCACATTT
GCCAACGAAC AAGTTGATGT TAGGGGGATG AGTGAGTCGA ATAATCGCCT TGCTGAAATG
ACCCGAAATA TTGATAATTC TGGTTGGTTG GGAGAAGCTT ATATTAGCTC TATCATTTCT
GGACCGACCG AACCTATAAA ACTAAGTCAG TTCGTAATGA AATTTGTTGT CATTCCTGAA
AGAAAAGGGG GAGAGTGA
 
Protein sequence
MSNINLLPWR DELKKKKKKM FLIFLGLSSI LILGVSYLGK LYVDALIGAQ NQRNEYLQVQ 
NTILDRRIAD VRQIKKEKEE LERRILLIQK LEEKRNYATH LFNILPQVVP TGIYLNSITF
ANEQVDVRGM SESNNRLAEM TRNIDNSGWL GEAYISSIIS GPTEPIKLSQ FVMKFVVIPE
RKGGE