Gene Ping_0150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0150 
Symbol 
ID4626355 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp194756 
End bp197338 
Gene Length2583 bp 
Protein Length860 aa 
Translation table11 
GC content44% 
IMG OID639795340 
Producttype III restriction enzyme, res subunit 
Protein accessionYP_941617 
Protein GI119943937 
COG category[V] Defense mechanisms 
COG ID[COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAGAA ACGAATCTGA AACCCGCGCT GACTTAATCT CGCCAAAATT GGCCTTAGAT 
GGCTGGGGAA CCACTGAGCG CAGTATTATT CGCCGTGAGT TCGGCATTAC CGCAGGCCGT
ATTTTAGGGG GTGGTAAACG AGCCTCAAGC CTGAGTAGTG ATTATGTTTT AGAATTCCAA
GGCCGAAAAC TTGCCGCCGT TGAAGCTAAA AGAGAAAGCT TAAGTTATAC AGAGGGTGTT
CGCCAAGCGA AAGACTACGC TCAACGTTTA CAATGCCGTT TTGCCTATGC CACCAACGGG
CATGACATTT ACCAAATAGA TATGCTAACG GGTTTTGAGC AGTTAGTAGA TAACTACCTA
AGCCCAGCCG ACATGTGGCG CTTGTGCTTC GAACCCGTCA CTGGAAAAAC AGAGCCTGAC
TATACTGCCA CATGGCGGAC ACGTTTTGCA CAAATACCCT TTGAATTTAA AGGTGACTGG
CAACCTCGTT ATTACCAAGA AAACGCCATT AACCAAGCAT TAGAAGCCAT AGCGTTAGGT
AAAGACCGCA TACTACTTGC TCTTGCTACA GGCACGGGTA AAACCTGTAT TGCCTTTCAA
ACCGCATGGA AGTTATTTCA CAGTCGTTGG AGTTTACAAG CGGCTAAAAA CCCCAGTAAT
GCTAAAAAAC GCCCTCGTAT TTTATTTTTG GCTGACCGTA ATATATTAAC CAAACAAGCC
TTTAATGACT TTGGTGCTTT TGGCGAAGAT GCCGTGGTGC GTATTACCCC GAGTGAAATT
AAAAAAGCCA AAGGTGTACC TAAAAACGCC AGTATCTTTA TGGCTATTTT CCAAACCTTA
ATGACAGATT CGGCTAGCAA CCCAACTAAC GACAGTGATG AGGAAGAATT GCCGGAAGAC
GAAGACTACA GCCTACCTAT AGTTACCGAC ACCAGTAATT GTAATTTCAG ACAATACCCC
GAAGACTTCT TCGATTTTAT TATTATTGAT GAATGTCACC GTGGCGGTGC CAATGACGAA
AGCTCATGGC GCGATATTCT TAACTATTTT GCGCCTGCTG TGCAATTAGG TTTAACCGCG
ACACCAAAGC GTACTGACAA TGTCGACAGC TATAAATACT TTGGTGAACC CGTTTACAGC
TACACATTAA AAGAAGGGAT CAACGACGGA TTTTTAACGC CCTTTAAGGT GTATCCAATT
GTCGGCACGA TGGACGAATA CCAATATACC CCGGGAGATG CGGTGACGTT TAAAGGCGAA
CCCGAAGCAG GCCGAGTATA TAAAGAAGGT GACTTTAACC GCATCATCAC TATGCCACAG
CGCGAACAAA AACGTGTGCA CTATTGGATG GATCACATCA ACCCACATGA TAAAACCATC
GTATTTTGTG GCACACAAGA ACACGCGGGC ATGGTGCGTG ATTATATTAA TCAATACGCA
GTGCAAAAGG GTTGGACAAC CAACCCAACG TATTGTGTAC GTATTACCGC TAACGATGGC
GCGGCGGGTG AGAATGATTT AAGAACCTTC TGCGACAACG AAAAAACCAT ACCAACCATA
TTAACTACGT CGCGTAAGTT ATCCACTGGC GTAGATGCTC GTAACGTACG TAACATCGTA
CTAATGCGGC CCTGTAATAA CATGATTGAG TTTAAGCAGA TTATTGGTCG TGGTACGCGA
CTGTACGACG GAAAATCATT TTTTACCGTG TATGATTTTG TAAAAGCACA TCATAATTTT
GCAGATCCAG AATGGGATGG TGAACCATTA CCTCCTAAAG AAAAACCAGA CGAACAACCT
TGTGATATTT GTAATGTCAG CCCATGCATT TGCATCTGTG AGGTTTGTGG TTTTAACCCA
TGTAACTGTA AAGACGACAC ACCAAACGAA CCCTGTGGCG AATGTAATCA ATCTCCTTGC
CAGTGTCTAA CTGAGCCTTG TAATAACTGC GGTGATACAC CTTGTAGCTG TAATACGGAT
GACGACGATG GGAATACGGG CAGACCAGAT AAAATATTCA TTACCCTAAC CGACGGAAAA
GTACGCCAAA TACAACACAT GAAAAGCGTA TTGTTTATGG GTGCCGATGG TGAAATGCTC
ACCGCAAAAC AATTTGTAGA ACAACTGTTT GGTGACTTAC CACGTTTTTT TGGTAACGAA
GATGAATTAC GCCAAATATG GAGCAATCCA AGCACACGCG AAAAGCTATT AACTGATTTG
TATGAAGCGG GTTACGATGA TGAAAAACTC GATAGCATGA AAGACATTAT CGATGCCAAA
GACAGCGACG TATATGACCT ATTAGCCTTT GTAGCCTACG CAAAAGACAC CCATACCCGT
AAAGAACGTG TCGCAACGGC GAAACCGGGT ATATCTAGTG AGTTCACCTA CAAACAAGTC
GAGTTTATCG AATTCATATT AGATAAATAC ATAGAAGACG GCGTACAAGA ATTGGCAGCT
AAAAAAATGC GCAGTTTGGT AGAACTTAAA TACAACACCA TAAGCGATGC CGCAGCAGAG
TTTGGTTCAC CGGCAGCAAT ACGTGACACG TTTATCGGCT TTCAGAAGCA TTTGTATCAG
TAG
 
Protein sequence
MNRNESETRA DLISPKLALD GWGTTERSII RREFGITAGR ILGGGKRASS LSSDYVLEFQ 
GRKLAAVEAK RESLSYTEGV RQAKDYAQRL QCRFAYATNG HDIYQIDMLT GFEQLVDNYL
SPADMWRLCF EPVTGKTEPD YTATWRTRFA QIPFEFKGDW QPRYYQENAI NQALEAIALG
KDRILLALAT GTGKTCIAFQ TAWKLFHSRW SLQAAKNPSN AKKRPRILFL ADRNILTKQA
FNDFGAFGED AVVRITPSEI KKAKGVPKNA SIFMAIFQTL MTDSASNPTN DSDEEELPED
EDYSLPIVTD TSNCNFRQYP EDFFDFIIID ECHRGGANDE SSWRDILNYF APAVQLGLTA
TPKRTDNVDS YKYFGEPVYS YTLKEGINDG FLTPFKVYPI VGTMDEYQYT PGDAVTFKGE
PEAGRVYKEG DFNRIITMPQ REQKRVHYWM DHINPHDKTI VFCGTQEHAG MVRDYINQYA
VQKGWTTNPT YCVRITANDG AAGENDLRTF CDNEKTIPTI LTTSRKLSTG VDARNVRNIV
LMRPCNNMIE FKQIIGRGTR LYDGKSFFTV YDFVKAHHNF ADPEWDGEPL PPKEKPDEQP
CDICNVSPCI CICEVCGFNP CNCKDDTPNE PCGECNQSPC QCLTEPCNNC GDTPCSCNTD
DDDGNTGRPD KIFITLTDGK VRQIQHMKSV LFMGADGEML TAKQFVEQLF GDLPRFFGNE
DELRQIWSNP STREKLLTDL YEAGYDDEKL DSMKDIIDAK DSDVYDLLAF VAYAKDTHTR
KERVATAKPG ISSEFTYKQV EFIEFILDKY IEDGVQELAA KKMRSLVELK YNTISDAAAE
FGSPAAIRDT FIGFQKHLYQ