| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0142 |
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| Symbol | |
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| ID | 4626347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 187432 |
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| End bp | 189051 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 639795334 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_941611 |
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| Protein GI | 119943931 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTGCACT TCTATGTTGA ACAAGGGTTT ACTCGCATTT CAGGCTACAG TGCAGAAGAG
GTTATTGGAC AGACACCCAA GCTCTTTAGC TCAGGCCGAC AAGACAAAGT GCTCTATAAG
GCGATGTGGA ACAGTATCAA TACCACCGAC GCATGGGAAG GTGAAATCTG GAATCGCCGC
AAAAACGGTG ACACCTATTT AGCGCATATG ACTATTGCCT CAGTGAGAGA CACGGGCAAG
ATGATCTCTA ATTATGTTGC TACGATCACC GATATTACCC TAAACAAAGC CGCCTCAGAA
AAAATCAATA ACCTCGCCTA CTTTGATCAA ATCACTCAGT TACCAAATCG TCTTTTGTTA
GTTGATAGGC TTAATCTCGC CCTAGCTGAA AGTGCGCACA GTAACCATCA TGGTGCATTA
CTATTTATTG ATTTAAACCA GCTTAAAATC ATCAACAACA CCCACGGGTA CAGTGTGGGA
AATTTACTGT TAAAAGAAGT AACTGCTCGC TTAACTCAGA TTGTAAGAAA AGCTGATACC
ATCGCCCGAT TAAGCGGTGA TGAGTTTGTA ATACTTTTAG AAAAATTGAG TGAGCGAGAC
ATTGAAGCTA ACACCGAAAT CCAAAATATT GCTAAAAAAA TTATTTTTTT ATTAACTCAA
CCTTACCAGC TCAATATGCA CAAATATCGT GGCACCATCA GTATCGGCGC AACAATATTC
AATGGGAATG AATTTGCATC GGAAAAACTG TTAAAGCAAG CTGATATTGC TATGCATCAA
TCTAGGCTCG CAGGGCACAA TCGCCTTTGT TTCTTTAATC AAACAATGCA AGAGGCTATT
ACAGCCCGTG CCGAGATGGA ACATGAACTA CGCGAAGCGA TTGAACACAA TCAATTTCAG
CTATATTATC AAATACAGGT TAGCAGTTCT GGTCAAGCAT TAGGGGCTGA AGCTTTAATC
CGTTGGCAAC ATCCAGAAGA TGGTTATATT TCCCCCTTTA ACTTTATCCC TTTAGCCGAA
GAAACAGGAC TTATTTTACC AATAGGGGAA TGGGTATTAA ACACAGCCTG CGCTCAACTT
AAAAAATGGC AAAAAAAACC ACTGACACAA GATCTTGTAC TCGCCGTTAA TGTAAGTGCT
CTACAAATTC ATCAAGAAGA CTTTGTAGAG CAACTAAAAA GCATCCTGCA AAAGCATGAA
ATCACCCCTG AACGACTTAA ACTAGAACTA ACTGAAAGTA TGTTGGTAGA AAATGTCAGT
GGCATTATTA CCAAAATTAA TACACTGAGA AAAATAGGTG TTTTATTCTC ATTAGATGAC
TTTGGTACGG GTTATTCTTC TTTACAATAT CTTAAAAAAT TGCCCATCAA TCAATTAAAA
ATAGACCAGT CATTTGTGCG TGACCTTCTC ACGGATACCA ATGACAGAGC GATTGTACGC
ACCATCATTA CCATGTCACA TAATTTAGGT ATTAACGTTA TTGCCGAGGG TGTAGAAACG
GTAGAACAAA GACAATACTT GTTGAGTGAA GGCTGTATGA ATTATCAAGG CTATCTATTT
AGTAAGCCCG TACCAATTGA TGAGTTTGAA GCGTTGATTT TTCGTTTAAG TGACACCTAA
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| Protein sequence | MVHFYVEQGF TRISGYSAEE VIGQTPKLFS SGRQDKVLYK AMWNSINTTD AWEGEIWNRR
KNGDTYLAHM TIASVRDTGK MISNYVATIT DITLNKAASE KINNLAYFDQ ITQLPNRLLL
VDRLNLALAE SAHSNHHGAL LFIDLNQLKI INNTHGYSVG NLLLKEVTAR LTQIVRKADT
IARLSGDEFV ILLEKLSERD IEANTEIQNI AKKIIFLLTQ PYQLNMHKYR GTISIGATIF
NGNEFASEKL LKQADIAMHQ SRLAGHNRLC FFNQTMQEAI TARAEMEHEL REAIEHNQFQ
LYYQIQVSSS GQALGAEALI RWQHPEDGYI SPFNFIPLAE ETGLILPIGE WVLNTACAQL
KKWQKKPLTQ DLVLAVNVSA LQIHQEDFVE QLKSILQKHE ITPERLKLEL TESMLVENVS
GIITKINTLR KIGVLFSLDD FGTGYSSLQY LKKLPINQLK IDQSFVRDLL TDTNDRAIVR
TIITMSHNLG INVIAEGVET VEQRQYLLSE GCMNYQGYLF SKPVPIDEFE ALIFRLSDT
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