Gene Ping_0139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0139 
Symbol 
ID4626344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp182140 
End bp184401 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content52% 
IMG OID639795332 
Productglycoside hydrolase family 3 protein 
Protein accessionYP_941609 
Protein GI119943929 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000855243 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAATA AAATGAACAA AGTCTTCTCT GTTACCCCGA TCGCTCTGGC AGTCTTTCTC 
GCCGGTTGCA ACAACGATGT AATAGAGACC ACGCAGGTCG TTAAGGCTGA GTTTGCACAG
ACCAAACTCG ATGCGCGCGG AGTTGATCTT ATCAGCACCG ACGGTTACCA GTTTAAAGAT
CTTAATAAAA ACGGAATATT GAATGTTTAT GAAGATTGGC GTAAGACAGT AGATGAGCGG
GTTGGCGATC TGGTTTCTCA GATGACGCTC GAAGAAAAAG TCGGCATGAT GCTGATTGAT
ACGATGAACG CTGCGGCTTA TGGTTCGGTG AACGGCACTC ACGTTGATTA TATCGAGCAG
CAGAAGATGA CCCGCTTTAT CTTCCGCAAC GCGATCCTGC CTCAGAACGA GGTTGACGCT
CTTCCTATTG GGGAGCGTGC GCCAGGAGGG GATATTGTCA CAGGTCGCGC CAGCGCATCG
ATCAGCCCCT CGGAAGCCGC TCAATATATG AATATCGTGC AGGAGTTAAG CGAGTCTACC
CGTCTGGGTA TCCCGGCGCT GTTTAAATCC AATGCGCGTA ACCATAACGA TCCTAATGCC
AGAGCCGGCA TTAACGTTTC TGCCGGTGCC TTCTCCGAAT GGCCGAAAGA GGCGGGTCTG
GCTGCTACCC GAGATATGGA GCTGATCGGC GAGTTCGCCC AGATTATGCG CACCGAGTGG
AATGCAATCG GTCTGCGCGG CATGTACGGT TATATGGCAG ATCTCTCCAC CGAGCCGCGC
TGGTACCGGG TACATGAAAC CTTTACTGAA GATTCTGATC TGGCTTCTGA AATTATGACG
GTGCTGGTCA GTAACCTGCA GGGTAAGGAG GTGACCCCTA GCAGTGTCGT CCTGACCATG
AAGCACTTTC CTGGCGGCGG TCCGCAGTTC CTAGGGTTAG ATCCGCACTA CATGGCGGGT
CAGCATCAGA GCTATCCGAC TGGCAATTTT GACTACCATG TTAAGCCCTT TAAAGCGGCG
ATCGATGCCG GTGTTGCGGC GCTGATGCCT TATTACGGTA TTGTCGGTGG CGGCGAGTGG
TCACTGAGTA ATCCGGACGA GACTAACTTG GATGTGGGTG GCATACAACT TGCCGAGGTT
GTCTCTGATC GTGTCCAAGA TACAGTACGT GTCCCGTATA ACGGATACAG CACGACCGAG
GGGACGCCTG CCGGTAATGT CGGAATAGCC TTCTCCAAAG GAATTTTGTC GGATCTGCTG
CGCAGGGATC TTGGCTTTAG CGGTGTGATT AACTCCGATA CCGGTATTAT CGGAGAGACC
AACAACGGTC TGTCTGATAC TGACACGATT CAAAACAACC GCGCCTGGGG TCTGCAGGAC
AAGGACAAGT CTGAACAGCT GGTTGTGGCT ATCGAAGCGG GCACCGATGT GTTCTCCGGT
TTCCACAGTA ATTCTGAGGT TCGTACTCTG GTCGAGCAGG GCCTGGTTTC TGAAGCGCGT
ATTGACGAGT CGGTTAAACG TTTGCTGAAA GTGCAGTTTG AGTTGGGGCT GTTTGAAAAT
CCTTATGTGG ATCCTGTACG TGCTAATGCC ATTGTCGGTA ACGCATCATT TCAGGAAAAA
GCTCTGCTGG CACAACGTAA AGCCGTTGTA CTGCTTGACA ATAAAGTCGC GGAAGGTGCA
GTAGAAGCAA TTCTGCCGCT TCCTGCAGCC GCTAATCTCT ATACTATGGG AATGGACAGC
GGGGTCGTTG AAGGTTACGG CTATACTGTG ACTAATGGTG ATCTAGAAGG TGAACGTCCG
AGCGCAGCAG AAAGTGATTA TGCGCTGATC CGTGTACGGG TAACCAATAA AGACACCGGC
TTGTTAGTGT TCGGTGGCGC GGACTTTAAA GAAGTCGATG TGCTGGACTT TACCGGTATG
GCGGCTGCGG GAACCTGGGA TATCACCCCG TCTCTGACAG ATATCCAGGC GGTGATGGCC
GAAGTTGGTG CCGAAAATAC CGTGCTTTCG GTGTACTTCC GTCAGCCTTT TGTAATGGAT
GAAGCCAGCG GCCTGAAAGA CGCCGGTGCT ATTCTAGCGA CTTTCGGCTC TAAGGATAAT
GCGCTGATGG ACGTTGTTAC TGGTGGGTTC AATCCAAGTG GCAAACTGCC GTTTGCACTG
GCTAACAGCA GTCAGGCGAT TATCGACCAG GCGTCTGACG CACCGGGTTA TGCTGAAGCA
GATACGCTGT ATCCATTCGG TTTCGGTCTG AGCTACGAGT AA
 
Protein sequence
MKNKMNKVFS VTPIALAVFL AGCNNDVIET TQVVKAEFAQ TKLDARGVDL ISTDGYQFKD 
LNKNGILNVY EDWRKTVDER VGDLVSQMTL EEKVGMMLID TMNAAAYGSV NGTHVDYIEQ
QKMTRFIFRN AILPQNEVDA LPIGERAPGG DIVTGRASAS ISPSEAAQYM NIVQELSEST
RLGIPALFKS NARNHNDPNA RAGINVSAGA FSEWPKEAGL AATRDMELIG EFAQIMRTEW
NAIGLRGMYG YMADLSTEPR WYRVHETFTE DSDLASEIMT VLVSNLQGKE VTPSSVVLTM
KHFPGGGPQF LGLDPHYMAG QHQSYPTGNF DYHVKPFKAA IDAGVAALMP YYGIVGGGEW
SLSNPDETNL DVGGIQLAEV VSDRVQDTVR VPYNGYSTTE GTPAGNVGIA FSKGILSDLL
RRDLGFSGVI NSDTGIIGET NNGLSDTDTI QNNRAWGLQD KDKSEQLVVA IEAGTDVFSG
FHSNSEVRTL VEQGLVSEAR IDESVKRLLK VQFELGLFEN PYVDPVRANA IVGNASFQEK
ALLAQRKAVV LLDNKVAEGA VEAILPLPAA ANLYTMGMDS GVVEGYGYTV TNGDLEGERP
SAAESDYALI RVRVTNKDTG LLVFGGADFK EVDVLDFTGM AAAGTWDITP SLTDIQAVMA
EVGAENTVLS VYFRQPFVMD EASGLKDAGA ILATFGSKDN ALMDVVTGGF NPSGKLPFAL
ANSSQAIIDQ ASDAPGYAEA DTLYPFGFGL SYE