Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0139 |
Symbol | |
ID | 4626344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 182140 |
End bp | 184401 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639795332 |
Product | glycoside hydrolase family 3 protein |
Protein accession | YP_941609 |
Protein GI | 119943929 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1472] Beta-glucosidase-related glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000855243 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATA AAATGAACAA AGTCTTCTCT GTTACCCCGA TCGCTCTGGC AGTCTTTCTC GCCGGTTGCA ACAACGATGT AATAGAGACC ACGCAGGTCG TTAAGGCTGA GTTTGCACAG ACCAAACTCG ATGCGCGCGG AGTTGATCTT ATCAGCACCG ACGGTTACCA GTTTAAAGAT CTTAATAAAA ACGGAATATT GAATGTTTAT GAAGATTGGC GTAAGACAGT AGATGAGCGG GTTGGCGATC TGGTTTCTCA GATGACGCTC GAAGAAAAAG TCGGCATGAT GCTGATTGAT ACGATGAACG CTGCGGCTTA TGGTTCGGTG AACGGCACTC ACGTTGATTA TATCGAGCAG CAGAAGATGA CCCGCTTTAT CTTCCGCAAC GCGATCCTGC CTCAGAACGA GGTTGACGCT CTTCCTATTG GGGAGCGTGC GCCAGGAGGG GATATTGTCA CAGGTCGCGC CAGCGCATCG ATCAGCCCCT CGGAAGCCGC TCAATATATG AATATCGTGC AGGAGTTAAG CGAGTCTACC CGTCTGGGTA TCCCGGCGCT GTTTAAATCC AATGCGCGTA ACCATAACGA TCCTAATGCC AGAGCCGGCA TTAACGTTTC TGCCGGTGCC TTCTCCGAAT GGCCGAAAGA GGCGGGTCTG GCTGCTACCC GAGATATGGA GCTGATCGGC GAGTTCGCCC AGATTATGCG CACCGAGTGG AATGCAATCG GTCTGCGCGG CATGTACGGT TATATGGCAG ATCTCTCCAC CGAGCCGCGC TGGTACCGGG TACATGAAAC CTTTACTGAA GATTCTGATC TGGCTTCTGA AATTATGACG GTGCTGGTCA GTAACCTGCA GGGTAAGGAG GTGACCCCTA GCAGTGTCGT CCTGACCATG AAGCACTTTC CTGGCGGCGG TCCGCAGTTC CTAGGGTTAG ATCCGCACTA CATGGCGGGT CAGCATCAGA GCTATCCGAC TGGCAATTTT GACTACCATG TTAAGCCCTT TAAAGCGGCG ATCGATGCCG GTGTTGCGGC GCTGATGCCT TATTACGGTA TTGTCGGTGG CGGCGAGTGG TCACTGAGTA ATCCGGACGA GACTAACTTG GATGTGGGTG GCATACAACT TGCCGAGGTT GTCTCTGATC GTGTCCAAGA TACAGTACGT GTCCCGTATA ACGGATACAG CACGACCGAG GGGACGCCTG CCGGTAATGT CGGAATAGCC TTCTCCAAAG GAATTTTGTC GGATCTGCTG CGCAGGGATC TTGGCTTTAG CGGTGTGATT AACTCCGATA CCGGTATTAT CGGAGAGACC AACAACGGTC TGTCTGATAC TGACACGATT CAAAACAACC GCGCCTGGGG TCTGCAGGAC AAGGACAAGT CTGAACAGCT GGTTGTGGCT ATCGAAGCGG GCACCGATGT GTTCTCCGGT TTCCACAGTA ATTCTGAGGT TCGTACTCTG GTCGAGCAGG GCCTGGTTTC TGAAGCGCGT ATTGACGAGT CGGTTAAACG TTTGCTGAAA GTGCAGTTTG AGTTGGGGCT GTTTGAAAAT CCTTATGTGG ATCCTGTACG TGCTAATGCC ATTGTCGGTA ACGCATCATT TCAGGAAAAA GCTCTGCTGG CACAACGTAA AGCCGTTGTA CTGCTTGACA ATAAAGTCGC GGAAGGTGCA GTAGAAGCAA TTCTGCCGCT TCCTGCAGCC GCTAATCTCT ATACTATGGG AATGGACAGC GGGGTCGTTG AAGGTTACGG CTATACTGTG ACTAATGGTG ATCTAGAAGG TGAACGTCCG AGCGCAGCAG AAAGTGATTA TGCGCTGATC CGTGTACGGG TAACCAATAA AGACACCGGC TTGTTAGTGT TCGGTGGCGC GGACTTTAAA GAAGTCGATG TGCTGGACTT TACCGGTATG GCGGCTGCGG GAACCTGGGA TATCACCCCG TCTCTGACAG ATATCCAGGC GGTGATGGCC GAAGTTGGTG CCGAAAATAC CGTGCTTTCG GTGTACTTCC GTCAGCCTTT TGTAATGGAT GAAGCCAGCG GCCTGAAAGA CGCCGGTGCT ATTCTAGCGA CTTTCGGCTC TAAGGATAAT GCGCTGATGG ACGTTGTTAC TGGTGGGTTC AATCCAAGTG GCAAACTGCC GTTTGCACTG GCTAACAGCA GTCAGGCGAT TATCGACCAG GCGTCTGACG CACCGGGTTA TGCTGAAGCA GATACGCTGT ATCCATTCGG TTTCGGTCTG AGCTACGAGT AA
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Protein sequence | MKNKMNKVFS VTPIALAVFL AGCNNDVIET TQVVKAEFAQ TKLDARGVDL ISTDGYQFKD LNKNGILNVY EDWRKTVDER VGDLVSQMTL EEKVGMMLID TMNAAAYGSV NGTHVDYIEQ QKMTRFIFRN AILPQNEVDA LPIGERAPGG DIVTGRASAS ISPSEAAQYM NIVQELSEST RLGIPALFKS NARNHNDPNA RAGINVSAGA FSEWPKEAGL AATRDMELIG EFAQIMRTEW NAIGLRGMYG YMADLSTEPR WYRVHETFTE DSDLASEIMT VLVSNLQGKE VTPSSVVLTM KHFPGGGPQF LGLDPHYMAG QHQSYPTGNF DYHVKPFKAA IDAGVAALMP YYGIVGGGEW SLSNPDETNL DVGGIQLAEV VSDRVQDTVR VPYNGYSTTE GTPAGNVGIA FSKGILSDLL RRDLGFSGVI NSDTGIIGET NNGLSDTDTI QNNRAWGLQD KDKSEQLVVA IEAGTDVFSG FHSNSEVRTL VEQGLVSEAR IDESVKRLLK VQFELGLFEN PYVDPVRANA IVGNASFQEK ALLAQRKAVV LLDNKVAEGA VEAILPLPAA ANLYTMGMDS GVVEGYGYTV TNGDLEGERP SAAESDYALI RVRVTNKDTG LLVFGGADFK EVDVLDFTGM AAAGTWDITP SLTDIQAVMA EVGAENTVLS VYFRQPFVMD EASGLKDAGA ILATFGSKDN ALMDVVTGGF NPSGKLPFAL ANSSQAIIDQ ASDAPGYAEA DTLYPFGFGL SYE
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