Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0135 |
Symbol | |
ID | 4626046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 177167 |
End bp | 178141 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639795328 |
Product | TRAP dicarboxylate transporter, DctP subunit |
Protein accession | YP_941605 |
Protein GI | 119943925 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0289854 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTC GTAAAAATAT ACTAACGACG GTTATTGGAA CAGCATTATT TATTGGTCTA TCTGCATCAT CTATAGCTGC GACAACCTTA AAGTTAAGCC ATAATCATAA TCGCGATCAT GCCGTGCATA AAGCGATGAC CGCAATGGCA ACAGAAGTTA AAGCGGAAAC AAAAGGTGAA GTGATAATTC GTATTTACCC AGATGCTCAA TTAGGTACGC AGCGTGAATC AATGGAGTTA TTGCAAAATG GTGCACTTGA TTTAGTAAAA AGTAATGCGG CAGAGCTGGA AGCATTTTCA TCTGACTACT CAGCATTCAA CTTACCTTAC TTATTCCGTG ACAAACAGCA TTTTTATAAC GTGCAAGAAG GCGCTGTAGG TGAAGATATT CTGGAAGCTT CTCGGAGTAG TGGTTTTATT GGTTTGACTT ATTATGATGC AGGAGCTCGA AGCTTTTACG CTGGTAAACC AATTAATAGC CCTGAAGACT TAAAAGGTCT AAAAGTTCGT GTTCAGCCTA GCCCTTCTGC AATTAACATG GTGACAGCGC TTGGCGGTAA CCCAACTCCA TTGGCATATG GTGAGTTATA TACTGCACTG CAACAAGGAG TGGTGGATGC TGCTGAAAAT AACATTCCAT CATTTAGCTT AAGTGGTCAT GCTGAAGTAT CTAAATTTAT GACCTTAGAT GAGCACACAA TGGTGCCTGA TGTATTGGTT ATTTCTACTA AAGCATTTGA TGCAATGACA CCAGAAAACC AAAAAATTGT TAAACAAGCA GCGCTTCACT CATCGCAATT AATGAAAACA CTTTGGGCTG AATCAGAAAC TAAAGAGCGT ACTAAAGCAG AAAAAATGGG TGTTACATTC ATTAACCCTG ATAAAACACC GTTTATGGAG GCTGTTCAGC CGATATATCA GCAGTTAACT CCTGAAATAA CCGCGTTAGT TGAGCGAATT AAAGCAGTTA AGTAA
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Protein sequence | MNIRKNILTT VIGTALFIGL SASSIAATTL KLSHNHNRDH AVHKAMTAMA TEVKAETKGE VIIRIYPDAQ LGTQRESMEL LQNGALDLVK SNAAELEAFS SDYSAFNLPY LFRDKQHFYN VQEGAVGEDI LEASRSSGFI GLTYYDAGAR SFYAGKPINS PEDLKGLKVR VQPSPSAINM VTALGGNPTP LAYGELYTAL QQGVVDAAEN NIPSFSLSGH AEVSKFMTLD EHTMVPDVLV ISTKAFDAMT PENQKIVKQA ALHSSQLMKT LWAESETKER TKAEKMGVTF INPDKTPFME AVQPIYQQLT PEITALVERI KAVK
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