| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0133 |
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| Symbol | |
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| ID | 4626044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 175017 |
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| End bp | 176324 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639795326 |
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| Product | TRAP dicarboxylate transporter, DctM subunit |
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| Protein accession | YP_941603 |
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| Protein GI | 119943923 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0170692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.860525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATGGC AAATCATTCT TACTCTTTTT GGGAGTTTTG CTGTGCTCCT CGTCATAGGT
GTGCCGGTTT CGTTTGCGAT TGGTTTATCT TCACTTGCAA CTATAATGCT AAGCCTTCCA
GCAGGTCCTG CCATTGCTGT CATAGCACAA CGTATGGCAA GCGGGTTAGA TAGCTTTGCT
CTGTTAGCTA TCCCATTTTT CATTTTAGCG GGTAATATAA TGAATCAGGG AGGTATTGCT
ACCCGCCTGA TAAACCTGGC TAAAGTGCTT GGAGGGCGCT TACCTGGTTC ACTTGCACAC
GTTAACGTCA TTGCAAACAT GATGTTTGGT TCAATTTCAG GTTCAGCCGT CGCCTCCGCG
GCGGCAGTAG GTGGAACAAT GGCGCCACTG CAAAAGAAAG AGGGTTATGA TGAACATTTT
TCTGCAGCGG TCAATATCAC TTCTTGCCCG ACAGGTTTGT TAATTCCCCC AAGTAATACC
TTGATTGTAT TTTCATTAGT TTCCGGCGGG ACATCTATCG CGGCGCTTTT CTTGGCGGGT
TATATTCCAG GGCTAATTAT GGGGTTAAGC TTAATGTGCG TCGCCGGGTT TATTTCCAAG
CGTCGTGGCT ACCCTCTCGC GCCGAGAGCA CCCTTATCTG AAGTTATTGA CACTACATTA
AAAGCCCTCC CTTCTTTAAC ACTCGTTATT ATTATCATGG GAGGTATCAT AGCCGGTATT
TTTACGGCAA CAGAAGCATC GGCAATCGCG GTGGTTTATA CCTTTTTACT GGCATTTGTT
TTTTACCGTG AAGCCAAATT GAGCGAGCTG CCAAAGATTA TTTTAGAATC AGCAGTGACG
ACCTCTATTG TTTTATTATT GATCGGCGCT TCAATGGGCA TGTCATGGGC CATGGCTAAC
GGTGATATTC CTTACATGAT TGCTGATGCG CTACTTGCTG TTTCGGATGA CCCATTGATT
ATACTTTTGA TTATTAACGT TATTTTGTTA ATCATCGGTA TCTTCATGGA CATGACACCG
GCAGTGCTTA TTTTTACACC TATCTTTTTA CCTATTGCAT TAGACTTAGG TATCGACCCT
GTGCACTTCG GCATAATGAT GACCTTTAAC CTTGCTATCG GTCTTTGTAC CCCCCCCGTA
GGCAGCGCGC TATTCATTGG TTGTTCTGTT GCAAAAATAT CCATTGATAA AGTCATTAAA
CCCTTATTAC CCTTCTACGC TGCTCTAATT GTTGCGCTTA TGGCCGTTAC CTTTATTCCT
GAGCTAAGCC TTTACTTACC CAGGTTATTT CTAGGTTACG GTGACTAA
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| Protein sequence | MEWQIILTLF GSFAVLLVIG VPVSFAIGLS SLATIMLSLP AGPAIAVIAQ RMASGLDSFA
LLAIPFFILA GNIMNQGGIA TRLINLAKVL GGRLPGSLAH VNVIANMMFG SISGSAVASA
AAVGGTMAPL QKKEGYDEHF SAAVNITSCP TGLLIPPSNT LIVFSLVSGG TSIAALFLAG
YIPGLIMGLS LMCVAGFISK RRGYPLAPRA PLSEVIDTTL KALPSLTLVI IIMGGIIAGI
FTATEASAIA VVYTFLLAFV FYREAKLSEL PKIILESAVT TSIVLLLIGA SMGMSWAMAN
GDIPYMIADA LLAVSDDPLI ILLIINVILL IIGIFMDMTP AVLIFTPIFL PIALDLGIDP
VHFGIMMTFN LAIGLCTPPV GSALFIGCSV AKISIDKVIK PLLPFYAALI VALMAVTFIP
ELSLYLPRLF LGYGD
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