Gene Ping_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0131 
Symbol 
ID4626042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp171998 
End bp173431 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content44% 
IMG OID639795324 
Productglucuronate isomerase 
Protein accessionYP_941601 
Protein GI119943921 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1904] Glucuronate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.825674 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTCAT CTATGAAAGC TTTTCTATGT GAAGATTTTC TTCTCAACAA TAATGTAGCA 
CGTCGTTTAT ACCATGACTT CGCGAAAGAC ATGCCTATCT ATGATTATCA CTGTCATTTA
AATGCGCAGG AAGTTGCCGA TAACCGTCAA TTTGATAACC TTGGACAAAT GTGGCTCGAA
GGCGATCACT ACAAATGGCG AGGCATGCGT ACAGCAGGCA TCAGCGAATC ATTAATCACA
GGCAAAGATA CCTCTGATTT TGAAAAATAC ATGGCATGGG CAAAAACAGT ACCGCAAACA
CTTGGTAATC CTCTATACCA TTGGACACAC CTAGAATTAC GCCGTCCCTT TGGCATAACG
GGAAAATTAT TTAATCCCGA CACCGCTGAA GTTATCTGGC ATGAGTGTAA CGAAATGCTT
GCCACGCCAG AATTTTCAGC TCGCGGCATA ATGAAAAAAA TGAACGTGGT AATGGCTGGC
ACAACTGATG ATCCTATTCA CTCCCTAGAG CACCACAAAG CTATTGCCGA AGATCCAGCC
TGTGATATTG AAGTGGCACC AAGCTGGCGT CCGGATCGCG CTTTTAAAAT TGAGATCGAA
GGCTTTAGTG AATATATGCG CCTGTTAGGC GAAGTAACTG ACATTGAAAT CGGCAGATTT
TCTGATCTCC TCAGTGCATT AGAGCAGCGT ATTGAGCACT TTTCGGCTCA TGGTTGCCGT
GCAGCAGATC ACGGTATTGA AGTGGTTCGT TACGCTACAG TACCAGTAGA ATCAACGCTT
GATTCTATTT TAACTCGCCG TCTAAGTCAG CAAACACTGA CCGAACAAGA GATAGATCAA
TTTACAACTG CTGTTCAGAT TTGGTTGGGC ACTCAATATG CTAAACGTGG CTGGGTAATG
CAATTGCACA TTGGTGCACA ACGTAATAAT AATACCCGCA TGTTTAAGCT GTTAGGGCCA
GATAGTGGTT TTGACTCAAT TGGGGATCGA CCCTTTGCAT TACAATTAGG CGCTTTACTT
GATGCCATGG ATATCACTAA TGAGTTGCCA AAAACTATTC TTTACTGCTT AAACCCTCGT
GATAACGAAA TGCTGGCTAC CATGATGGGT AACTACCAAG GTGGCGGTAT TGCCGGAAAA
ATTCAATTCG GCTCAGGTTG GTGGTTCAAC GATCAAAAGG ACGGTATGCA GCGCCAAATG
CAGCAGCTAT CGCAATTAGG GTTACTCAGC AAGTTTGTGG GTATGTTAAC CGATTCCCGC
AGCTTCTTAT CTTATACTCG CCATGAATAT TTCCGTCGTA TTTTATGTAA TATGGTTGGT
CAGTGGGTAG AGGACGGTGA AGCGCCAAAT GATATAGCAA TGCTTGGTAA GCTGATACAA
GATGTTGCTT TTAACAACGC TAAAACCTAC TTCAAGTTAC CTGGGGAGCA GTGA
 
Protein sequence
MESSMKAFLC EDFLLNNNVA RRLYHDFAKD MPIYDYHCHL NAQEVADNRQ FDNLGQMWLE 
GDHYKWRGMR TAGISESLIT GKDTSDFEKY MAWAKTVPQT LGNPLYHWTH LELRRPFGIT
GKLFNPDTAE VIWHECNEML ATPEFSARGI MKKMNVVMAG TTDDPIHSLE HHKAIAEDPA
CDIEVAPSWR PDRAFKIEIE GFSEYMRLLG EVTDIEIGRF SDLLSALEQR IEHFSAHGCR
AADHGIEVVR YATVPVESTL DSILTRRLSQ QTLTEQEIDQ FTTAVQIWLG TQYAKRGWVM
QLHIGAQRNN NTRMFKLLGP DSGFDSIGDR PFALQLGALL DAMDITNELP KTILYCLNPR
DNEMLATMMG NYQGGGIAGK IQFGSGWWFN DQKDGMQRQM QQLSQLGLLS KFVGMLTDSR
SFLSYTRHEY FRRILCNMVG QWVEDGEAPN DIAMLGKLIQ DVAFNNAKTY FKLPGEQ