Gene Ping_0118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0118 
Symbol 
ID4626187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp155863 
End bp157293 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content41% 
IMG OID639795314 
Productsoluble pyridine nucleotide transhydrogenase 
Protein accessionYP_941591 
Protein GI119943911 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0589234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.30721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACAG TAAAAGATAC AACAGTTAAA CCTAAACACG ATCATTATGA TGCTATTGTT 
ATTGGTAGCG GTCCGGGTGG AGAGGGTGCT GCAATGAAGC TTGCTAAGGG AGGCTTGCGC
GTTGCTATTG TAGAAAAATA TAAAGATATC GGCGGGGGCT GTACCCATTG GGGAACCATT
CCTTCCAAGG CGTTGCGTCA CAGTGTCAGC CAACTTATTG AATTAAAGAA AAACCCATTA
TTTCTTACCA ATTACCCTCA GAATAAAACA TTTACTTTTA GAGACGTTTT GACTCATACA
CAAAGTGTGA TTGCCAAGCA GGTAACGATG CGCAGTGGTT TTTATAATCG TAACAATTGC
AGTTTATATT TTGGTGGTGC TAACTTTGTT GATAAAAACA CTGTTTTAAT TACCAAAGAT
GATGGCACAA CAGAAACTAT TACTGCCAAA GATATTATCA TTGCCACGGG ATCGCGCCCT
TATCGCCCTG CAGACATTGA CTTTACTGCG GCCAATATTT ACGACAGTGA TACCATTCTT
GCCTTAGACC ACCATCCGCA ACACATTGTG ATTTATGGGG CAGGTGTTGT GGGTTGTGAA
TATGCTTCGA TATTCAACGG GTTAGGCGTC AAAACAGACT TAATTAATAC TCGGGATAGT
TTACTGTCAT TTTTAGATAC AGAAATGTCC GATGCACTTT CCTATCATTT TAGAAATTCA
GGCATGATCC TGCGCCATGA TGAAGAATAT GAAAAAGTGG AAAGTACAGA GGAAGGGGTT
GTGATCCACT TGAAGTCGGG TAAAAAGATG AAAGCTGACT GTCTGCTATA TGCTAATGGA
CGCACGGGTA ACACGGATAA ATTAGCCTTA GAGAATATTG ATCTAAAACC CGATCCCCGA
GGACAGCTCA CCGTCAACGA ACATTATCAA ACCGGGGTCG ATAATATTTA TGGACTTGGG
GATATCATTG GTTATCCAAG CCTTGCCAGT GCCGCTTATG ATCAGGGCCG GATTGCAGCC
CACTTTATAT TAACCCAAGA GGGTAAGAAA AAACTGATAA AAGATATTCC AACGGGTATT
TATACTATTC CGGAAATTAG CTCCGTAGGT AAAACTGAAC AGATGTTAAC CCAGCAAAAA
GTTCCCTATG AGGTGGGACG TGCACTGTTT AAAGATTTAG CACGTTCACA AATTTTAGGC
TCAGAGGTAG GCAGTTTAAA AATACTCTTT CACCGCGAAA CAAAAGAGAT ATTAGGAATT
CATTGTTTTG GCGAGCGGGC AGCTGAAATT ATTCATATTG GACAAGCTAT CATGGAACAA
AAAGGGGAAG GGAATACCAT TGAGTATTTT GTTAAGACGA CCTTTAACTA TCCAACCATG
GCAGAAGCTT ACCGTGTGGC AGCTTTGAAT GGTCTAAATA GATTGTTTTA G
 
Protein sequence
MSTVKDTTVK PKHDHYDAIV IGSGPGGEGA AMKLAKGGLR VAIVEKYKDI GGGCTHWGTI 
PSKALRHSVS QLIELKKNPL FLTNYPQNKT FTFRDVLTHT QSVIAKQVTM RSGFYNRNNC
SLYFGGANFV DKNTVLITKD DGTTETITAK DIIIATGSRP YRPADIDFTA ANIYDSDTIL
ALDHHPQHIV IYGAGVVGCE YASIFNGLGV KTDLINTRDS LLSFLDTEMS DALSYHFRNS
GMILRHDEEY EKVESTEEGV VIHLKSGKKM KADCLLYANG RTGNTDKLAL ENIDLKPDPR
GQLTVNEHYQ TGVDNIYGLG DIIGYPSLAS AAYDQGRIAA HFILTQEGKK KLIKDIPTGI
YTIPEISSVG KTEQMLTQQK VPYEVGRALF KDLARSQILG SEVGSLKILF HRETKEILGI
HCFGERAAEI IHIGQAIMEQ KGEGNTIEYF VKTTFNYPTM AEAYRVAALN GLNRLF