| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0113 |
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| Symbol | metH |
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| ID | 4626182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | + |
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| Start bp | 145732 |
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| End bp | 149415 |
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| Gene Length | 3684 bp |
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| Protein Length | 1227 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 639795309 |
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| Product | B12-dependent methionine synthase |
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| Protein accession | YP_941586 |
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| Protein GI | 119943906 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.352445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGTTA ACGATCGAAG CGCACTTATT AAGGCGCAGC TAGAAAAGCA TATCCTTCTT
ATTGATGGAG CCATGGGCAC CATGATCCAG TCTTATAAAT TTGAAGAAGA GGATTATCGT
GGTGAACGTT TTGCTGATTG GTCCTGTGAC GTTAAAGGCA ATAATGATCT GTTGGTTTTA
TCTCAACCTC GAGTGATTGC GGATATTCAC CGTGAATATT TAGATGCCGG GGCAGACATT
CTTGAAACGA ATACCTTTAA TGCAACTACT ATTGCCATGG CTGATTATCA AATGCAGTCA
TTATCAGCAG AAATAAATCG TGAAGCCGCC CGTTTAGCGC GTCAAGAGGC TGATCAAAAA
ACCGCAGAAA CACCGGAACG CCCACGTTTT GTGGCTGGTG TTTTAGGCCC AACAAACCGT
ACCTGCTCAA TCTCTCCGGA TGTAAACGAT CCTGCCTTTC GTAATGTCAG CTTTGATGAA
CTCGTTGAGG CGTACACTGA ATCAACCCGC GCGTTAATTG AAGGCGGGTG TGACCTCATT
TTAATTGAGA CTATTTTTGA TACGCTCAAT GCCAAAGCAG CCGTTTTCGC GGTAAGTGGT
GTTTTTGATG AGCTCGGTTA TAAATTACCC GTTATGATCT CCGGCACAAT AACTGATGCC
TCCGGACGAA CGCTTACCGG GCAAACAACC GAAGCTTTTT ACAACTCATT ACGCCATATT
GAGCCTATCT CATTTGGTCT AAACTGTGCG CTTGGACCCG AGGAACTGCG CCAATATGTG
CAGGAGATAT CGAAGATTTC AGAAACATAT GTTTCAGCAC ACCCGAATGC GGGTTTACCT
AATGCCTTTG GTGAATATGA TTTAGAAGCC GATGAAATGG CTGCGCATAT TAAAGAGTGG
GCAGAAAGTG GTTTCTTAAA TTTAGTTGGT GGCTGTTGCG GCACGACGCC CGCGCATATT
AAAGCAATGG CTGATGCTGT TGCCGGCGTA AAACCGCGCG CCCTGCCTGA GATTGAAATT
GCCTGCCGAT TAAGCGGATT AGAAGCATTA ACTATCCGCA AAGATTCTCT CTTTCAAAAT
GTTGGCGAGC GGACCAATGT AACAGGCTCT GCCCGCTTTA AGCGCTTAAT CATGGACGAG
CTTTATGATC AGGCACTAGA GGTGGCACTT CATCAAGTGA CAGCTGGCGC CAATATTATC
GATATTAATA TGGATGAAGC GATGCTTGAT TCATTGTATG CGATGAAACG TTTTCTTAAT
TTATGTGCCT CTGAGCCGGA TATTTCCAGA GTACCGATTA TGATCGACTC GTCTAAATGG
GAAATTTTAG AAGAGGGCAT GAAGTGTGTG CAAGGTAAGG GGATTGTTAA TTCGATCAGC
ATGAAAGAGG GCGTTGATAA TTTTATTGCT CAGGCTAAGT TAATCCGCCG TTATGGTTTT
GCTGTGATTG TAATGGCTTT TGATGAAGAC GGGCAAGCCG ATACGCGTGC CCGTAAATTT
GATATTTGTA AACGTTCTTA CGATATTCTG GTTAACCAGG TGGGGTTCCC GCCGGAAGAT
ATTATTTTTG ACCCCAATAT TTTTGCTGTG GCCACGGGTA TTTCCGATCA TAACAATTAT
GCCGTTGATT TCATCGAAGC GGTTAAAGAT ATTAAAACCA ATCTACCCCA TGTGATGATC
TCAGGTGGTG TTTCTAACGT TTCTTTCTCC TTTCGGGGCA ATAACCCCGT TCGTGAAGCT
ATCCATGCTG TGTTTCTCTA TCACTGTATC CAAAATGGCA TGGACATGGG CATTGTTAAT
GCAGCACAAC TGGCCATTTA TGATGATATC CCAAAAGAGT TAAAAGAAGC CGTTGAAGCG
ATTATTTTAA ATACCAGCCC GGATGCAACG GATAATTTAC TGGAGCTGGC GGAAAAATAC
CGAGATTCCG GCAGTGAAAA AGTGGATGAT GGCAAGTCCT TGGAATGGCG GAACCTGCCC
GTTAACGAAC GTATTGCCCA TTCTTTAGTA AAAGGTATTA CCGAGTTTAT TGTGGAAGAT
ACCGAAGAAG CACGCGTCAA TGCTGAAATG CCCATAGACG TTATTGAAGG GCCATTAATG
GATGGTATGA ATATTGTTGG CGATCTCTTT GGTGACGGAA AAATGTTTTT ACCACAAGTG
GTTAAGTCGG CGCGTGTTAT GAAACAGGCG GTGGCTTATC TCAACCCTTA TATTGAAGAA
ACTAAAGCGG TTGGTGCGAC CAACGGTAAA ATCGTTATGG CCACGGTTAA AGGGGATGTC
CACGATATTG GTAAAAATAT TGTCGGTGTT ATTTTACAGT GTAATAACTA TGAAATTATC
GATCTTGGTG TCATGGTGCC AACTGAAAAA ATCATTAAAA CGGCGATAGC AGAAAAGGCT
GATATAATTG GTTTATCCGG CCTAATTACC CCCTCCTTAG ATGAAATGGT GTATGTTGCC
AAGGAGATGC AGCGTCAGGG TTTGAAATTG CCGTTATTAA TCGGGGGAGC AACAACCTCT
AAAGCCCATA CCGCAGTAAA AATAGAGCAG AATTACGATC AGCCCGTGGT CTATGTGTCT
AATGCATCCC GTGCAGTCGG GGTTTGTCAG AAATTATTAA ATCCCGTTCA TAAACTAGAA
TTTGTGAAAA AATTGGATGA AGATTATGTT AGGGTACGTG AACAATATGC TAATAGACGT
CCTCGCAGCG CACCCGTTTC ACTACAGCGA GCGCGTGCTA ACGCCGCTAA AATTGATTGG
GCTAATTACC AACCACCCGT ACCAAATCAA CTGGGTGTGC AGGTTATTAA AAAGATGTCG
ATTAAAATAT TACGTGAATA TATTGACTGG ACTCCCTTCT TTTTGACTTG GGGACTAGCA
GGCAAGTATC CGAGAATTCT TGAGGATGAA GTTGTTGGCG AAGAAGCTAA GCGTTTATTT
GCTGATGCAC TGGCAATGCT TGATGTCGTT GAAGCACAAG GGGAAATATC TGCCAGCGGT
ATGGTTGGCA TTTTTCCTGC GAACAGTGTG GGTGATGATA TCGAAATTTA CACCGATCAA
ACGCGCAGTA AAATATTACA AATGAGTCAT CATCTGCGCC AGCAAAGCGA GAAAAAACCG
CCCTTTGTCA ATCATTGTTT AGCCGACTAC ATTGCGCCTA AATCATTGGG TATTGCCGAT
TATATTGGCG CATTTGCTGT GACGGGAGGT ATCGGTGAAA AGGAAGTTGC CGAGCGTTAT
AAAGCCGAAC TTGATGATTA CAATGCGATT CTGGTACAGG CTATTTGTGA CCGTTTAGCC
GAGGCCTTTG CTGAATATCT GCATCAGAAA ACCCGCAAGG AATATTGGGG ATTTGCAGCG
AATGAAACCC TAGAGTGTGA TGATTTGATT CGTGAAAAAT ACCAGGGTAT TCGCCCGGCA
CCGGGTTATG CTGCCTGTCC TGAGCATACC GAAAAGCAAG TGATTTGGGA CTTAATGGAT
GTAGAGCAAC AGATTGGTAT GCAGTTAACC AGCAGTTATG CGATGTTCCC GGGAGCTGCG
GTCTCGGGAT GGATTTTCTC GCATCCTGAA AGTCGTTATT TTGCCGTTGC ACATATTCAG
CAGGATCAGT TAGAGGATTA CGCAGGGCGT AAAGGCTGGG ATTTACTAAC GGCAGAGCGC
TGGTTAGGTC CTAACCTTTC ATAA
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| Protein sequence | MVVNDRSALI KAQLEKHILL IDGAMGTMIQ SYKFEEEDYR GERFADWSCD VKGNNDLLVL
SQPRVIADIH REYLDAGADI LETNTFNATT IAMADYQMQS LSAEINREAA RLARQEADQK
TAETPERPRF VAGVLGPTNR TCSISPDVND PAFRNVSFDE LVEAYTESTR ALIEGGCDLI
LIETIFDTLN AKAAVFAVSG VFDELGYKLP VMISGTITDA SGRTLTGQTT EAFYNSLRHI
EPISFGLNCA LGPEELRQYV QEISKISETY VSAHPNAGLP NAFGEYDLEA DEMAAHIKEW
AESGFLNLVG GCCGTTPAHI KAMADAVAGV KPRALPEIEI ACRLSGLEAL TIRKDSLFQN
VGERTNVTGS ARFKRLIMDE LYDQALEVAL HQVTAGANII DINMDEAMLD SLYAMKRFLN
LCASEPDISR VPIMIDSSKW EILEEGMKCV QGKGIVNSIS MKEGVDNFIA QAKLIRRYGF
AVIVMAFDED GQADTRARKF DICKRSYDIL VNQVGFPPED IIFDPNIFAV ATGISDHNNY
AVDFIEAVKD IKTNLPHVMI SGGVSNVSFS FRGNNPVREA IHAVFLYHCI QNGMDMGIVN
AAQLAIYDDI PKELKEAVEA IILNTSPDAT DNLLELAEKY RDSGSEKVDD GKSLEWRNLP
VNERIAHSLV KGITEFIVED TEEARVNAEM PIDVIEGPLM DGMNIVGDLF GDGKMFLPQV
VKSARVMKQA VAYLNPYIEE TKAVGATNGK IVMATVKGDV HDIGKNIVGV ILQCNNYEII
DLGVMVPTEK IIKTAIAEKA DIIGLSGLIT PSLDEMVYVA KEMQRQGLKL PLLIGGATTS
KAHTAVKIEQ NYDQPVVYVS NASRAVGVCQ KLLNPVHKLE FVKKLDEDYV RVREQYANRR
PRSAPVSLQR ARANAAKIDW ANYQPPVPNQ LGVQVIKKMS IKILREYIDW TPFFLTWGLA
GKYPRILEDE VVGEEAKRLF ADALAMLDVV EAQGEISASG MVGIFPANSV GDDIEIYTDQ
TRSKILQMSH HLRQQSEKKP PFVNHCLADY IAPKSLGIAD YIGAFAVTGG IGEKEVAERY
KAELDDYNAI LVQAICDRLA EAFAEYLHQK TRKEYWGFAA NETLECDDLI REKYQGIRPA
PGYAACPEHT EKQVIWDLMD VEQQIGMQLT SSYAMFPGAA VSGWIFSHPE SRYFAVAHIQ
QDQLEDYAGR KGWDLLTAER WLGPNLS
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