Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0108 |
Symbol | |
ID | 4626177 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 140042 |
End bp | 140671 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 639795304 |
Product | SOS-response transcriptional repressor, LexA |
Protein accession | YP_941581 |
Protein GI | 119943901 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.341365 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGAGC TAACCAAGCG TCAAAATGAA GTATTGGATG TGATCAAAGA TCAAATATTA AAGACGGGAA TGCCTCCTAC ACGAGTTGAA TTAGCTAAGA TCCTTGGTTT TCGAAGCGCT AATGCAGCAG AAGAGCACCT TAAAGCTTTA GCGCGTAAAG GTGCGATTGA AATTTTAGCA GGCACATCTC GTGGAATCCG TCTTTTGGGT GAGCATCAAC ATAATGAAAA AGCGCACCAG GACGGATTGC CTCTTATTGG TCAAGTCGCT GCAGGTGAAC CGATTTTAGC TCAGCAGCAT ATTGAAACCT ATTATGATGT TGATCCTGCT TTATTTCACC CTAGTGCTGA TTTTTTACTG CGAGTGCAGG GTGAAAGCAT GAAAGATATC GGTATTATGG ATGGTGATCT GCTGGCTGTA CATAAAACCC AAGATATCAA AAACGGGCAA GTGGTCATCG CCCGTGTTGA AGATGATGTA ACAGTCAAAC GTTTTTATCG AGAAGGCCGC CAGGTGATAT TAAAAGCAGA AAACAATGAT TTTGGTCCGA TTAAAATAGA CCTTGCATAT CAATCTTTTG ATATCGAAGG GATAGCCGTT GGTGTCATTC GAACAGCAGA TTGGATGTAA
|
Protein sequence | MKELTKRQNE VLDVIKDQIL KTGMPPTRVE LAKILGFRSA NAAEEHLKAL ARKGAIEILA GTSRGIRLLG EHQHNEKAHQ DGLPLIGQVA AGEPILAQQH IETYYDVDPA LFHPSADFLL RVQGESMKDI GIMDGDLLAV HKTQDIKNGQ VVIARVEDDV TVKRFYREGR QVILKAENND FGPIKIDLAY QSFDIEGIAV GVIRTADWM
|
| |