Gene Ping_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0108 
Symbol 
ID4626177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp140042 
End bp140671 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content42% 
IMG OID639795304 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_941581 
Protein GI119943901 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.341365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAGC TAACCAAGCG TCAAAATGAA GTATTGGATG TGATCAAAGA TCAAATATTA 
AAGACGGGAA TGCCTCCTAC ACGAGTTGAA TTAGCTAAGA TCCTTGGTTT TCGAAGCGCT
AATGCAGCAG AAGAGCACCT TAAAGCTTTA GCGCGTAAAG GTGCGATTGA AATTTTAGCA
GGCACATCTC GTGGAATCCG TCTTTTGGGT GAGCATCAAC ATAATGAAAA AGCGCACCAG
GACGGATTGC CTCTTATTGG TCAAGTCGCT GCAGGTGAAC CGATTTTAGC TCAGCAGCAT
ATTGAAACCT ATTATGATGT TGATCCTGCT TTATTTCACC CTAGTGCTGA TTTTTTACTG
CGAGTGCAGG GTGAAAGCAT GAAAGATATC GGTATTATGG ATGGTGATCT GCTGGCTGTA
CATAAAACCC AAGATATCAA AAACGGGCAA GTGGTCATCG CCCGTGTTGA AGATGATGTA
ACAGTCAAAC GTTTTTATCG AGAAGGCCGC CAGGTGATAT TAAAAGCAGA AAACAATGAT
TTTGGTCCGA TTAAAATAGA CCTTGCATAT CAATCTTTTG ATATCGAAGG GATAGCCGTT
GGTGTCATTC GAACAGCAGA TTGGATGTAA
 
Protein sequence
MKELTKRQNE VLDVIKDQIL KTGMPPTRVE LAKILGFRSA NAAEEHLKAL ARKGAIEILA 
GTSRGIRLLG EHQHNEKAHQ DGLPLIGQVA AGEPILAQQH IETYYDVDPA LFHPSADFLL
RVQGESMKDI GIMDGDLLAV HKTQDIKNGQ VVIARVEDDV TVKRFYREGR QVILKAENND
FGPIKIDLAY QSFDIEGIAV GVIRTADWM