Gene Ping_0107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0107 
Symbol 
ID4626176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp139160 
End bp139912 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content42% 
IMG OID639795303 
Producttype II secretion system protein N 
Protein accessionYP_941580 
Protein GI119943900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.692762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTA AGTTTATTAT ATTCTTTGTA TCTTTTTATC TGGTCGCGTT GCTTGCCACC 
TTACCGGCAA CTGCATTATT GCGTTTTATC CCTCAAAACA CGGGGCTCCA GATTGCCGGT
GTTTCCGGCT CTGCATGGCA GGGCGAAGCC GCGTTATTAT CCTATAACAA AAAACTTAAC
CTGCAGCGCG TCTCATGGGA TGTAGATTGG TTCGCATTGG CTGCTTTGCA GATTAAACTG
AATGTTAAAT TTAACAATGG TCAGAATGCC ATGTCAGGAA AAGGTTTTGT TAAATTAGGT
CTTTCCGGGC TGGCGATTGA AAATGTGTTG CTTGATTTAA GTGCTCAGGA ATTGCTCTCC
TATGCAGATT TACCCATTCC TGTTGAAGCA TCGGGCGATA TTACCCTGGT AATAAAAGAG
GCATCACAGG GTGAACCCTA TTGCGATACA TTGGATGGTT TTTTTGTTTG GAAAAATGCT
GGGATCAACA GTGATCTTGG TAAAATAGAT TTAACCACTA TGAACATTAA TTTGAGTTGT
GATAAGGGTA ATGCAGTGGC TATTTTGCAG CAGGAATCAG AACAGCTAAG CAGCAACATT
AATATCTTAT TGCAGCAAGG TGGTGCTTAC CGGCTAGTCG GAACAGTTAA AGGCAGTAAT
AAACTTAGTC CTGACATAAA TCAGGCACTC TCCTTTTTGG GGCCAAAAGA TGCTTCTGGT
GCTACTGTAG TGCGCTTTAA TGGCCGTTTG TAG
 
Protein sequence
MKIKFIIFFV SFYLVALLAT LPATALLRFI PQNTGLQIAG VSGSAWQGEA ALLSYNKKLN 
LQRVSWDVDW FALAALQIKL NVKFNNGQNA MSGKGFVKLG LSGLAIENVL LDLSAQELLS
YADLPIPVEA SGDITLVIKE ASQGEPYCDT LDGFFVWKNA GINSDLGKID LTTMNINLSC
DKGNAVAILQ QESEQLSSNI NILLQQGGAY RLVGTVKGSN KLSPDINQAL SFLGPKDASG
ATVVRFNGRL