Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0102 |
Symbol | |
ID | 4625025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 135255 |
End bp | 135641 |
Gene Length | 387 bp |
Protein Length | 128 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 639795298 |
Product | general secretion pathway protein I |
Protein accession | YP_941575 |
Protein GI | 119943895 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01707] general secretion pathway protein I [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAG AACGAAACTC GGTTATGTAT AAAGACAGCG GTATGACCTT ACTTGAGGTT CTGCTGGCAC TGGTTATTTT AGCGACAGCA GGACTCGCTG TTATGAACGC TGCTTCAGGT GCATTAAATA GCCAGGCTTA TCTGCAGGAT AAAACCTTTG CATTGTGGAT TGCCAGCAAT GGATTAGCGG AACTGAAGCT AGAGAACGAG TGGCCATCGA ATACCTGGCG CTCCGATCAA GTTGATTTTG CTGGTAGTAC TTGGTATTCA CGTTACCAGG GGGTTGTCAC CGTCGATGAT AATTTTAAAG CGTTGGATAT CGAAGTGAGT GATAAAAAAG ACGGTAACGC GCTGGCTTAC ATTAGGACTT ACATTGTCAA ACCCTAA
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Protein sequence | MKSERNSVMY KDSGMTLLEV LLALVILATA GLAVMNAASG ALNSQAYLQD KTFALWIASN GLAELKLENE WPSNTWRSDQ VDFAGSTWYS RYQGVVTVDD NFKALDIEVS DKKDGNALAY IRTYIVKP
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