Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0086 |
Symbol | |
ID | 4626640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 115296 |
End bp | 116246 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 639795282 |
Product | transaldolase B |
Protein accession | YP_941559 |
Protein GI | 119943879 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0176] Transaldolase |
TIGRFAM ID | [TIGR00874] transaldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.946439 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.860525 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATA AATTAGATCA ACTTCGTAAA TTCACTACTG TAGTCGCCGA TACCGGTGAT GTTGAAGAAA TCGCTAAATA CCAGCCAGAG GATGCAACAA CCAACCCATC TTTAATTTTA AAAGCCGCAC AACTAGCAGA TTATAAATAC CTTATTGATT CATCGATCGC TTATGCAAAA TCCAAGAGTG CAGATAAAGC GCAACAGATT GTTGATACTT GCGACATGCT AGCAGTTAAT ATTGGTAAAG AAATTCTTAA AATAGTACCC GGACGTATCT CTACGGAAGT CGATGCGCGT TTGTCCTATG ATACTGAAAA AAGCGTTCTT AAAGCACGAC AGTTAATTAA AATGTATAAC GATGCAGGTA TAAAAAATGA CCGAATCTTA ATCAAACTCG CTTCCACCTG GGAGGGTATC CGTGCTGGTG AAATCCTTGA AAAAGAAGGA ATTAATTGTA ATCTGACACT TTTATTCTCT TTCGCTCAGG CACGCGCATG TGCAGAAGCC GAGGTTTTCC TTATCTCTCC CTTTGTTGGT CGTATTATGG ATTGGTATAA GGCCAAAGAA GGAAAAAGTT TTGCGGGCGT TGAAGATCCT GGTGTTATCT CCGTTTCTAA TATTTACAAC TACTACAAAG AGCATGGTTA TAAGACAGTT GTGATGGGTG CAAGCTTCCG AAATGTAGAT GAAATACTGG AATTAGCCGG TTGCGATCGC CTTACAATCA GCCCGCAATT GTTGCAGGAA CTAAAAGATA GCAGCGGTGA CGTTATTGAA AAACTGACGG AAGATGTATT ACTCAAAGCA TCTCCTGAAA AAATGACTCA TGCTGATTTT CTGTGGCAGC ATAATCAAGA TCCGATGGCT GTTGAAAAAT TAGCTGAGGG TATTCGAAAC TTTGCGGTTG ATCAGGGTAA GCTTGAAACC ATGATTGCAG ATCTTCTATA A
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Protein sequence | MSNKLDQLRK FTTVVADTGD VEEIAKYQPE DATTNPSLIL KAAQLADYKY LIDSSIAYAK SKSADKAQQI VDTCDMLAVN IGKEILKIVP GRISTEVDAR LSYDTEKSVL KARQLIKMYN DAGIKNDRIL IKLASTWEGI RAGEILEKEG INCNLTLLFS FAQARACAEA EVFLISPFVG RIMDWYKAKE GKSFAGVEDP GVISVSNIYN YYKEHGYKTV VMGASFRNVD EILELAGCDR LTISPQLLQE LKDSSGDVIE KLTEDVLLKA SPEKMTHADF LWQHNQDPMA VEKLAEGIRN FAVDQGKLET MIADLL
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