Gene Ping_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0086 
Symbol 
ID4626640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp115296 
End bp116246 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content40% 
IMG OID639795282 
Producttransaldolase B 
Protein accessionYP_941559 
Protein GI119943879 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00874] transaldolase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.946439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.860525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATA AATTAGATCA ACTTCGTAAA TTCACTACTG TAGTCGCCGA TACCGGTGAT 
GTTGAAGAAA TCGCTAAATA CCAGCCAGAG GATGCAACAA CCAACCCATC TTTAATTTTA
AAAGCCGCAC AACTAGCAGA TTATAAATAC CTTATTGATT CATCGATCGC TTATGCAAAA
TCCAAGAGTG CAGATAAAGC GCAACAGATT GTTGATACTT GCGACATGCT AGCAGTTAAT
ATTGGTAAAG AAATTCTTAA AATAGTACCC GGACGTATCT CTACGGAAGT CGATGCGCGT
TTGTCCTATG ATACTGAAAA AAGCGTTCTT AAAGCACGAC AGTTAATTAA AATGTATAAC
GATGCAGGTA TAAAAAATGA CCGAATCTTA ATCAAACTCG CTTCCACCTG GGAGGGTATC
CGTGCTGGTG AAATCCTTGA AAAAGAAGGA ATTAATTGTA ATCTGACACT TTTATTCTCT
TTCGCTCAGG CACGCGCATG TGCAGAAGCC GAGGTTTTCC TTATCTCTCC CTTTGTTGGT
CGTATTATGG ATTGGTATAA GGCCAAAGAA GGAAAAAGTT TTGCGGGCGT TGAAGATCCT
GGTGTTATCT CCGTTTCTAA TATTTACAAC TACTACAAAG AGCATGGTTA TAAGACAGTT
GTGATGGGTG CAAGCTTCCG AAATGTAGAT GAAATACTGG AATTAGCCGG TTGCGATCGC
CTTACAATCA GCCCGCAATT GTTGCAGGAA CTAAAAGATA GCAGCGGTGA CGTTATTGAA
AAACTGACGG AAGATGTATT ACTCAAAGCA TCTCCTGAAA AAATGACTCA TGCTGATTTT
CTGTGGCAGC ATAATCAAGA TCCGATGGCT GTTGAAAAAT TAGCTGAGGG TATTCGAAAC
TTTGCGGTTG ATCAGGGTAA GCTTGAAACC ATGATTGCAG ATCTTCTATA A
 
Protein sequence
MSNKLDQLRK FTTVVADTGD VEEIAKYQPE DATTNPSLIL KAAQLADYKY LIDSSIAYAK 
SKSADKAQQI VDTCDMLAVN IGKEILKIVP GRISTEVDAR LSYDTEKSVL KARQLIKMYN
DAGIKNDRIL IKLASTWEGI RAGEILEKEG INCNLTLLFS FAQARACAEA EVFLISPFVG
RIMDWYKAKE GKSFAGVEDP GVISVSNIYN YYKEHGYKTV VMGASFRNVD EILELAGCDR
LTISPQLLQE LKDSSGDVIE KLTEDVLLKA SPEKMTHADF LWQHNQDPMA VEKLAEGIRN
FAVDQGKLET MIADLL