| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0085 |
|---|
| Symbol | |
|---|
| ID | 4626639 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 113145 |
|---|
| End bp | 114980 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639795281 |
|---|
| Product | glucosamine--fructose-6-phosphate aminotransferase |
|---|
| Protein accession | YP_941558 |
|---|
| Protein GI | 119943878 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
|---|
| TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.800313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.506708 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGTGGAA TCGTTGGTGC AGTAGCACAA AGAGATGTAT CTGAAATCTT ATTAGAAGGA
TTACAACGCT TAGAATATCG CGGTTATGAT TCAGCAGGCC TTGCCGTTAT TAGTGCTGAT
GGACAATTAC AACGAACACG TCGTTTAGGA AAAGTAAAAG AATTAGCCAA TGCGGTTGCC
GCTAATCCTG TCAGCGGTGG AACCGGTATT GCACATACGC GCTGGGCAAC ACATGGAGAG
CCCTCAGAAG CCAATGCACA TCCTCATCTC TCCGGCGATA ATATTGTTAT CGTCCATAAC
GGTATTATTG AAAACTACGA AAGCTTACGC GAAACCCTGC GCGGGCGTGG TTATGAATTT
CTTTCACAAA CCGATACTGA AGTAATTTGC CATCTTGTTG AATGGGAATT ACGCAGTGCA
GAAACACTTT TAGAAGCCGT GCAAAAGACA TTGCCTCAGC TGGAAGGTGC CTATGGCACT
GTGGTCATGG ATCGCCGTGA TCCAAGTCGT TTAGTGGTCG CCCGTTCGGG GAGTCCACTG
GTAATAGGCT TGGGAGTTGG GGAAAATTTT CTGGCATCGG ACCAACTGGC TTTATTAAAT
GTAACACGTC GTTTTATCTT CTTAGAAGAA GGGGATGTTG CTGAAATTAC CCGCCGAGAC
ATTAATGTTT TTGATTTGAA TGGCAAGGCG ATTGAGCGTG AAGTTCACGA ATCAACTATT
GAGCAAGATG CAGCCGATAA AGGCAAGTAC AGACACTTTA TGCAAAAAGA AATTTTCGAG
CAACCCAGCG CATTAATAAA TGCAATGGAA GGTCGAATCA GTCATGACAG TGTATTAGTT
GAGAGTATTG GTGTTGGTGC AAAAGATATC CTGAAAAATG TAGAGCATGT ACAGATTATC
GCCTGCGGTA CATCTTATAA CTCAGGCATG GCTGCCCGTT ACTGGTTTGA GTCCCTCGCC
GGCGTAAGCT GTGATGTGGA AATAGCTTCT GAATTCCGTT ACCGAGATTT TGTCGTGCGT
CCAAATAGCC TATTGCTGAC TCTGTCACAA TCGGGTGAAA CTGCAGATAC GCTGGCAGCG
TTACGCTTAG CCAAGCAGAA AGGTTACATG TCGGCGATGT CTATCTGTAA TGTTTCCGGG
TCATCTTTGG TACGCGAATC GGATCTTGCT TTTATGACCC GCGCGGGTAC TGAGATTGGT
GTTGCATCCA CCAAAGCATT TACAACGCAG CTGGCTGCCA TGCTTATTTT GGTTACCGCT
ATTGGTAAAG AGCAGGGCAC TATCAGCAAA GAAAAAGAAG CAAAGATTGT ACGTGCATTG
CATTCACTCC CAGCGCAAAT TGAGAAAGCA TTAGCCTTTG ATAAACCGAT TGAAGCCTTA
GCAGAAGATT TTGCAGATAA AGAGCACACA TTATTCTTAG GCCGGGGTGA ATTTTACCCT
ATTGCCATGG AAGCGGCGCT TAAATTGAAA GAAATTTCAT ACATTCATGC TGAAGCTTAT
GCGGCAGGTG AGTTGAAGCA TGGCCCATTA GCGCTAGTTG ATGCAGATAT GCCCGTTGTT
GTGGTTGCAC CAACCAATGA CTTGCTTGAA AAAGTTAAAT CAAATATTGA AGAGGTACGT
GCACGTGGTG GTCAGTTGTA TGTATTTGCA GATGAAAGCG CCGGGTTTGA AAGTTCTGAA
GGTATGAAAA TTATTACTTT ACCCAGTGTA GATGAAATCA TTGCTCCTAT TTTTTACACT
GTGCCAATGC AGTTATTGGC TTATCATGTG GCATTAATTA AAGGCACTGA TGTGGATCAA
CCGCGTAATC TTGCAAAAGC GGTTACGGTT GAATAA
|
|---|
| Protein sequence | MCGIVGAVAQ RDVSEILLEG LQRLEYRGYD SAGLAVISAD GQLQRTRRLG KVKELANAVA
ANPVSGGTGI AHTRWATHGE PSEANAHPHL SGDNIVIVHN GIIENYESLR ETLRGRGYEF
LSQTDTEVIC HLVEWELRSA ETLLEAVQKT LPQLEGAYGT VVMDRRDPSR LVVARSGSPL
VIGLGVGENF LASDQLALLN VTRRFIFLEE GDVAEITRRD INVFDLNGKA IEREVHESTI
EQDAADKGKY RHFMQKEIFE QPSALINAME GRISHDSVLV ESIGVGAKDI LKNVEHVQII
ACGTSYNSGM AARYWFESLA GVSCDVEIAS EFRYRDFVVR PNSLLLTLSQ SGETADTLAA
LRLAKQKGYM SAMSICNVSG SSLVRESDLA FMTRAGTEIG VASTKAFTTQ LAAMLILVTA
IGKEQGTISK EKEAKIVRAL HSLPAQIEKA LAFDKPIEAL AEDFADKEHT LFLGRGEFYP
IAMEAALKLK EISYIHAEAY AAGELKHGPL ALVDADMPVV VVAPTNDLLE KVKSNIEEVR
ARGGQLYVFA DESAGFESSE GMKIITLPSV DEIIAPIFYT VPMQLLAYHV ALIKGTDVDQ
PRNLAKAVTV E
|
|---|
| |