Gene Ping_0076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0076 
Symbol 
ID4626630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp102477 
End bp103535 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content41% 
IMG OID639795272 
ProductDNA protecting protein DprA 
Protein accessionYP_941549 
Protein GI119943869 
COG category[L] Replication, recombination and repair
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake 
TIGRFAM ID[TIGR00732] DNA protecting protein DprA 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTTTAG ATGCCATCCC AACGCTTCAT AAACGCACGC TATTAAAACT GCTGACTTAT 
CATTCAATTG AACAGTTATT ACAGTTATCT CGAAATCAAC TGCAAGCCTA CGGATTAAAA
GACAATCAAA TAGCAGCGCT GCTTAAACCG AATCTAAAAT TAATTGAAAG TAACCTGTCC
TGGTTAGATA ACTCACCAGA AAATCATATT ATTTGTTACG ACAGCCCACA TTACCCGCAA
TTATTAAGGG AAATAAGCAG CCCCCCATTA TTACTTTATT TACAAGGCAA TATTGGTTTA
TTAAGCACCC CTCAAATTGC GATAGTAGGG AGTCGTAACT GTACCCCCTA CGGGCAAGAA
AAGGCTTATC AATTCGCACA GCAATTAAGT ACTTCAGGTT TTACCATTAC CAGTGGTTTA
GCCATTGGCA TTGATGGGCT TGCGCATCAA GGAGCTATTG ACAAACAGGG TCATACTGTT
GCTGTATTAG GTACCGGATT AAATAACATT TATCCAAAGC GGCATCTTAA ACTTGCACAG
CAAATAAAAG AAAAGGGGTT GTTGGTATCA GAGTTTTGGC CAAACGCAGC TGCCTTTCCT
GCTAATTTCC CCAGACGGAA TCGCATTATT TCAGGTTTAA GTTTAGGCGT GTTAGTGATT
GAGGCTTCAA AACGTAGCGG ATCATTAATC ACTGCACGCT ATGCATTAGA GCAAAATCGG
GATGTCTTTG CCCTGCCCGG TTCAATTGAT AATGCAGAGG CCTGGGGCTG CCATCAACTG
ATTCAACAGG GTGCAAAACT GGTCATGAAT ACTCAGGATA TATGTGATGA ATTTAGCCAC
TTATGTGACC CATTTTCAAG CAGTGATGGA GAAACAACAT CCCTTGCCAC ACCTTGCCAC
CCTCTCTTAA AGCATATTGA TTTTCACCTC ACTACCCTTG AGCAATTATT GAATCGTAGC
GGTTTCGATG TAGCGACCTT ACAAAATCAG TTAATAGAAC TTGAGATAAC TGGTAGAATA
ACAGTCACAA CCCAAGGTTA TATAAAGTTA AGCAATTAG
 
Protein sequence
MVLDAIPTLH KRTLLKLLTY HSIEQLLQLS RNQLQAYGLK DNQIAALLKP NLKLIESNLS 
WLDNSPENHI ICYDSPHYPQ LLREISSPPL LLYLQGNIGL LSTPQIAIVG SRNCTPYGQE
KAYQFAQQLS TSGFTITSGL AIGIDGLAHQ GAIDKQGHTV AVLGTGLNNI YPKRHLKLAQ
QIKEKGLLVS EFWPNAAAFP ANFPRRNRII SGLSLGVLVI EASKRSGSLI TARYALEQNR
DVFALPGSID NAEAWGCHQL IQQGAKLVMN TQDICDEFSH LCDPFSSSDG ETTSLATPCH
PLLKHIDFHL TTLEQLLNRS GFDVATLQNQ LIELEITGRI TVTTQGYIKL SN