| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0046 |
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| Symbol | |
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| ID | 4623538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 66314 |
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| End bp | 67786 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 639795238 |
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| Product | transcriptional regulator |
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| Protein accession | YP_941519 |
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| Protein GI | 119943839 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0170475 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGATT TTTTAATAAA TATTGAGCTC CATCAAAACA GCACTTATCA GCAACAAATC
CGTGAAAAAT TAGTACAGCT GATCACTCAA GACACCTTTG GTGACAAGCC TCTCCCCTCC
GGCCGGAAGA TGGCTGAACT GCTTGGCGTA TCAAGAAATA CCGTTGTATT GGTCTACGAA
AGCCTGGTTG ATGAAGGTTA TCTTGTTGCT CGTGAACGTT GTGGTTTTTT TGTTGATCCC
GATTTATCCA TGGAGCAGCT CCCCAAGACG GTGCAACTTA ACCCTAAAAA GATTTCTCGT
CAGCCAAATT GGTGCGAGCG ATTACAAAAA AAACCCAGCA AGCTATCCAC ACTGAACAAA
GATGAAAATT GGATAAAGTA CACTTATCCC TTTATTTATG GACATATAGA TGTCAATGAA
TTCCCCCTTT ATCAATGGCG AGAGTGTTCT CGGATCGCGG AAAGCAAAGG TAAATTGCAT
GAATGGGTAG AAGGTTTTAT TGATATGGAT GACCCGCAGC TGGTTTCGCA GATCCGCCAG
CAAATTTTAT CCAAACGTGG CATCAGTGCT AAGACAGATG AAGTATTAAT CACTCTGGGC
ACTCAAAACT CGCTGTTTTT ATTAACCAGC TTATTAGCTG ATAAGTCAGT CACTTTTGGT
GTCGAAAATC CGGGTTATGC CAACCTACGA CATGTTATCT CATTATGTGA TAGTCCCGTT
AAAGCGCTTA AAATTGATCA TCAAGGTGTA CAGGTAGGCG AACAGCTCAA AGCTTGTGAT
TATGTCTGCG TGACACCCAG CCATCAATAC CCAACCACGG TAACAATGAC AATAGAGCGC
CGCAAAGCAT TGCTTGAGCA AGCATGTAAA GATGACTTTA TTGTTATTGA AGATGACTAC
GAAAGTGAAG TTAATTTTAT AGAAAAGCCA CTGCCGGCTC TGAAAAGTTT TGATCAGGAC
GGTCGAGTCA TTTATACGGG CAGTTTATCC AAGTCACTCT CGCCAGGAAT ACGGATAGGT
TATTTGGTTG CAGACAGTTC ATTAATTACT GAACTGCGTA AATTGCGCGC CTTGCATTAC
CGTCATCCGC CATCCAATAA CCAGCGCATT ACAGCGTTAT TTCTCAGCCA GGGTTATTAT
GACAGCCATA TTCGCCGGAT GCGTCAATCC TATGAAAAAA AGTGGCTACT GATGCAACAA
GGCATTGAGC GCCATCTCGG TGACTGCGAG ATCCACTCTA CCGCGGGCAG TTTCTGTTTC
TGGATTGGTT TACCGGCAGG TATTAACAGT CATTTATTAG TCGATATTGC AGCCGAACAG
GGCATTTTAG TCGAATCTGG CGATAGTCTT TTTATGCAGG AAAATGCACC TGAAAATTAT
ATTAGACTTG GATTTTCAGC GATTAGCGGC GACAAGATTT TACCAGGGTT AGCCATTTTG
GGAGAGCTGA TTAACACACT GAAGAATAAA TGA
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| Protein sequence | MADFLINIEL HQNSTYQQQI REKLVQLITQ DTFGDKPLPS GRKMAELLGV SRNTVVLVYE
SLVDEGYLVA RERCGFFVDP DLSMEQLPKT VQLNPKKISR QPNWCERLQK KPSKLSTLNK
DENWIKYTYP FIYGHIDVNE FPLYQWRECS RIAESKGKLH EWVEGFIDMD DPQLVSQIRQ
QILSKRGISA KTDEVLITLG TQNSLFLLTS LLADKSVTFG VENPGYANLR HVISLCDSPV
KALKIDHQGV QVGEQLKACD YVCVTPSHQY PTTVTMTIER RKALLEQACK DDFIVIEDDY
ESEVNFIEKP LPALKSFDQD GRVIYTGSLS KSLSPGIRIG YLVADSSLIT ELRKLRALHY
RHPPSNNQRI TALFLSQGYY DSHIRRMRQS YEKKWLLMQQ GIERHLGDCE IHSTAGSFCF
WIGLPAGINS HLLVDIAAEQ GILVESGDSL FMQENAPENY IRLGFSAISG DKILPGLAIL
GELINTLKNK
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