| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0041 |
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| Symbol | |
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| ID | 4623533 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 59442 |
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| End bp | 60707 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 639795233 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_941514 |
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| Protein GI | 119943834 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.437243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00781145 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGATCACT TTAATTATCA AAATGATGGC CGTCTTTTTG TTGAAGGATT ACCTGTAGAG
CAAGTTGTTA AAAAAACAGG GACACCTGCC TATATCTACT CACGTGCAAC TATCGAGCGT
CATTGGCAAG CTTTTGATAG CGCAGCAGGA AAACACCCCC ATCTAATCTG TTACGCCGTT
AAAGCAAACT CTAACTTGGC TGTATTAAAC CTGATGGCTA GAATGGGATC CGGATTTGAT
ATCGTTTCTG TCGGTGAATT AATGCGGGTG ATTCAAGCCG GTGGAGATCC GAAAAAAATC
GTCTTCTCAG GCGTAGGTAA AACGGAAATC GAAATATCAG CGGCACTGCA AGCAAATATT
ATGTGTTTTA ATGTTGAATC TATTTCGGAA CTGTACCGCA TTAATAGTGT TGCCAAAGCG
CTAAATGTTA AAGCTCCCAT CTCAATCCGC ATTAATCCTA ATATTGATGC AGGGACTCAT
CCTTATATCT CTACCGGTTT AAAAGAGAAT AAATTTGGTA TCGAAATTGA ACAAGCGCTA
GACGTTTATA AAATAGCGAG CGATCTTGAA TTTTTAGAAA TAAAAGGCGT AGATTGCCAT
ATCGGTTCGC AGTTAACTGA AATAGCGCCC TTTATTGAAG CCTTAGACAA ATTGTTAATT
TTAATCGATT TATTAGCGGA AAAAGGCATT ACTATCTCTC ATCTGGATTT AGGAGGTGGG
TTAGGTGTGC CTTATGATGA CGAAACGCCA CCAGAGCCGG CTGAATATAT GACCGCAATC
ATTAATAGAA TGGCCGGTCG CAGTCTCAAA CTTATTTTTG AACCTGGCCG CGCTATTATG
GCCAATGCGG GTGTACTGGT AACTAAAGTT GAATTTTTAA AACTGAATGA CTACAAAAAC
TTTGCCATTG TCGATGCAGC GATGAACGAT TTAATCCGTC CGGCGTTATA CAGTGCATGG
CAAAATATTA TCCCGCTAAA TACGGACTAT CAGGATGGCC AAGATCGCCC CGTACGCAGC
TACGACATTG TTGGTCCTAT TTGTGAAACG GGTGATTTTT TAGGCAAAGA ACGTCAGCTT
GCTTTAGCTG AAGGTGATTA TCTGGTTATC CGCAGTACAG GCGCCTATGG TTCAACCATG
AGCTCTAACT ACAACTCACG TTGCCGCGCT GCCGAAATAT TAGTCGATGG CGAAAAAGCC
TTTATCGTGC GTGAACGCGA AGAGCTTAAA GATTTATGGC GCGGAGAGCA CATTTTACCA
ATATAA
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| Protein sequence | MDHFNYQNDG RLFVEGLPVE QVVKKTGTPA YIYSRATIER HWQAFDSAAG KHPHLICYAV
KANSNLAVLN LMARMGSGFD IVSVGELMRV IQAGGDPKKI VFSGVGKTEI EISAALQANI
MCFNVESISE LYRINSVAKA LNVKAPISIR INPNIDAGTH PYISTGLKEN KFGIEIEQAL
DVYKIASDLE FLEIKGVDCH IGSQLTEIAP FIEALDKLLI LIDLLAEKGI TISHLDLGGG
LGVPYDDETP PEPAEYMTAI INRMAGRSLK LIFEPGRAIM ANAGVLVTKV EFLKLNDYKN
FAIVDAAMND LIRPALYSAW QNIIPLNTDY QDGQDRPVRS YDIVGPICET GDFLGKERQL
ALAEGDYLVI RSTGAYGSTM SSNYNSRCRA AEILVDGEKA FIVREREELK DLWRGEHILP
I
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