Gene Ping_0025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0025 
Symbol 
ID4624955 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp37743 
End bp38789 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content40% 
IMG OID639795218 
Productpentapeptide repeat-containing protein 
Protein accessionYP_941499 
Protein GI119943819 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAAAG ATGAGTTAAT AAAAGCTGTA AAAGGGGGCG AGCCCCTGAT TCAAGGCAGC 
GATTTATCGG GTGGTGACTA CCAAGGCGCT GATTTAGGTG GCGGTACCTT TGAGTCGGTA
AATTTTTCGG GGGCTGATCT GACAGGTGCC AAATTAAAAG AATGTAATTT TATTAATTGC
ACTTTTACTA AGGCAAAACT GGATAGTGCA AATTTAATTT TAGCCAATTT TATTGAGCCC
AATGGTGAGG GGATTAGTAT AAAGGGCAGT GATTTACGGC TGGCTAATTT TATTGATGCC
AATTTTGCTC AGGCGGATTT ATCCGATGCC AATTTAGAAA ATACCAGTTT TATTAATCCT
AACCTTAAAG CGGCAAAATT GATTGGTGCA AAATTAACGC AGTGTCATTT TATTAACGCT
AATTTAGAGC AGGCTGATTT TTCCAACGTT ATTATGTTTC GCGCTAATTT TATTGAGGCA
CAAGTTCAGG GGATTGTATT TACCGGTGCG CACTTAGAGC TGCCTTTTTT TATGAAAGCT
GACTTTACCG GTTATGATTT TACTAATATA AAGATGATCA AACCGCAGTT CCAAGAAAGC
ATTTTAGTGG AGGCAAATTT CAGCAATATG GACATCAGTC ATGCAGGTTT TATGGAGGCG
AATTTAAGTA AGGCGAATTT TTCCAATGTA ATAGCCAAAG AAGCCAACTT TATTAAAGCG
AACCTGCACC AGGCTAACTT TGTGAATGCC CAAATGCCCC GTGCGTTATT TCAAGAGGCA
AACTTAACTA AAGCTTATTT TACTAATGTT TATGCTGAGC AAACGCTGAT GGTTAAAACC
GATTGTACGG GGGCTGTTTT TGCGGGCGCT GATTTCACTT ACGCGGACTT CAGCCATGCA
ATCTTAACGG AAGCTGATAT GTCGGGTACT CGGTTATTCT CAACAAATTT ACACGAAATT
ATTGAACAGA AAACCAACTG GCAAAATGCC AGCAGGCAGC TTGCCAAAGA AACGGATGAA
ATGAAAAAAA AGGCCGAAAA ATGGTAG
 
Protein sequence
MLKDELIKAV KGGEPLIQGS DLSGGDYQGA DLGGGTFESV NFSGADLTGA KLKECNFINC 
TFTKAKLDSA NLILANFIEP NGEGISIKGS DLRLANFIDA NFAQADLSDA NLENTSFINP
NLKAAKLIGA KLTQCHFINA NLEQADFSNV IMFRANFIEA QVQGIVFTGA HLELPFFMKA
DFTGYDFTNI KMIKPQFQES ILVEANFSNM DISHAGFMEA NLSKANFSNV IAKEANFIKA
NLHQANFVNA QMPRALFQEA NLTKAYFTNV YAEQTLMVKT DCTGAVFAGA DFTYADFSHA
ILTEADMSGT RLFSTNLHEI IEQKTNWQNA SRQLAKETDE MKKKAEKW