Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0015 |
Symbol | |
ID | 4625104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | + |
Start bp | 20951 |
End bp | 22315 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 639795208 |
Product | hypothetical protein |
Protein accession | YP_941489 |
Protein GI | 119943809 |
COG category | [S] Function unknown |
COG ID | [COG3522] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR03353] type VI secretion protein, VC_A0114 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.947734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTCAA TGAAGTCGAT ATATTGGAAT CAGGGGCTAT TTTTAAAACC TCAGCATTTT CAACAGTTAG ATAGATATAC ATCCACTATG TCTAATCTAT ATTCTAAAGT TCGTAGCGGC GTAGAATCAG GTATTTCAGA ATTAAAATTT GATCTTTCTG CTTTGAAAAC AGGTTTATTA GTCATTGAAA AGTTGGAATG TATATTAGAA GACGGCAGTT TACTTTTATA CCCGGGAAAC TGTCAAATTC CACCATTAAG GTTAGACAAA GAGCAGTTTG ATGACAGTGG GAATCTGAAT ATATTTATTG CTTTAGCACC CATTTCTGCA GAGCAAAATA ATTTAGTTTC AAATTCATCA CCCGATGCTC GCTTTAAGCT TGCCGCTGAT ATCAATAAAA AAGATCTATT TGATAATAAT GAACAAGCAA CGTTATCGAT GTTAGATTTT AATTGTAATT TAGTTCCAAG CTATAATTTG AAAAGTACTG CGGGTTTATC TCTTCTTAAA GTAGCTGAAA TATTTTTATC GGTTGATCAA TGCACACCTT CAGAAACTTT TATTCCTAAG ATAACGTTAT TAAGCGGTTC TGAAGTACTT AAGAATTTAG TCAAATCAAC TAAACAAAGT TTAGTCGGGC GATTTGAACA ACTTCAAAAT ATAACCTCTT TTGAATCAGG ACTTGTAAAT AGCTCAAATA ATTTATCTGT CGGTTTAGCG ATGATGTCAA TTAGTAATCA TATTGCCACA TTTATCCAGT TTGAAGAAAA TCCATCAACA CAAGTCTCTG ATATTTATCT GGCTTATCGA CAATTAATCT CACAATTGAG CATGTTTTCG ACAGAAGTTT CAGTTATTGG TGAAACCCTT ACTGAAGAAA ATTCTATTAT CCCGTTTAAT CAAAATAATT TAAGCGATTG TTTTTCTAAA GTAAATAATC TGACAACTAA ATTATTAAAC GAGTTGACCG TTCAGCCTGA ATTATTAGTT AATTTAATTT ATCAGGGTGA TTCAAAATTT GTAGCCCAAT TATCGCGTGA ATTTTTAGAT CCCGGTTACC GGATTTATCT AAGAATTAGA ACCAAAGAAA ATGTCATTGA TCATTTAGAT AATATTCTTA ATTTTCTAAA AGTTGGGGCC GATGGACAAG TTGATGTTTA CTTGAAAAGA GCACTTCCGG GAGTTCAATT GTCGTATTTA GATAAAAAAC CCCAAGGAGT TGCGACTGTC CCGAATAGCT ATTATTTTGG TCTTGATAGG CAGTCCTTCC AATGGCAGAA AGTCATTGAG TTAAGCCGAA TTGGTGTTAT TTGGAGTGAT TATATAGAAG ACGTTGCTCT CGATTTGATC GCTGTTCAAG GATAA
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Protein sequence | MDSMKSIYWN QGLFLKPQHF QQLDRYTSTM SNLYSKVRSG VESGISELKF DLSALKTGLL VIEKLECILE DGSLLLYPGN CQIPPLRLDK EQFDDSGNLN IFIALAPISA EQNNLVSNSS PDARFKLAAD INKKDLFDNN EQATLSMLDF NCNLVPSYNL KSTAGLSLLK VAEIFLSVDQ CTPSETFIPK ITLLSGSEVL KNLVKSTKQS LVGRFEQLQN ITSFESGLVN SSNNLSVGLA MMSISNHIAT FIQFEENPST QVSDIYLAYR QLISQLSMFS TEVSVIGETL TEENSIIPFN QNNLSDCFSK VNNLTTKLLN ELTVQPELLV NLIYQGDSKF VAQLSREFLD PGYRIYLRIR TKENVIDHLD NILNFLKVGA DGQVDVYLKR ALPGVQLSYL DKKPQGVATV PNSYYFGLDR QSFQWQKVIE LSRIGVIWSD YIEDVALDLI AVQG
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