Gene Ping_0014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPing_0014 
Symbol 
ID4625103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychromonas ingrahamii 37 
KingdomBacteria 
Replicon accessionNC_008709 
Strand
Start bp20228 
End bp20935 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content39% 
IMG OID639795207 
Producthypothetical protein 
Protein accessionYP_941488 
Protein GI119943808 
COG category 
COG ID 
TIGRFAM ID[TIGR03352] type VI secretion lipoprotein, VC_A0113 family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATT TCATTTATAA CTCAACAATA TGGATACGCA TCACTTGCAT ATCTATATTG 
CTGAGCGGTT GTAGTCTATT GCCTAATAGT CAGGTGGAAG TACAGAAAAA AGATAATATT
GATTATTGGT CTGATAGCTC AGGGTCTTGG GAAAACTGGG ATGAAAACCA CCCCAGTAAT
GAACTTGTTG CTTGGACATA TGATAAAGAT GGCATTCAAG TCAATTTCGT TGCCCGTCCA
GAATTAAATA TATTTGGACA ACGGTCCCAC ACTTTAGTCG TCAAAATTGT TCAGTTATCA
GAAGTCTCAG GTATCAATAC GCTTTTTCAG ACCAACGAAG GGATTGCCGC TGCGTTAACG
CAAGAAACTG AAATGATACC TAATGCCATA TTTAGTGAAT CATTTGTTTT GGGGCCAAAG
CAAAACCTTA TGTTCAGGCT AGCCCGCCAA GAAAATGCCA AGTATATCGC TATTATTGCA
GGTTTTGCTG AGCTAGATAG GCGGCAAGCG GTACGCATTA TTCCTATTTC TGTTAATACT
ACGTTACAAG AGCCGATCGA TGCCGAGTGG ACTACTTTGG ACAAGATGAC CTTTGGCTAT
TTTGTAAGTA AAGAGCCTCA ACCCGATATT TTAAGACCCT CAAATATTAG GCTTAATATT
GACTTTGGTG AAAACAGTAT TACAAAGTTC AGCGCGACAG CTGAATAA
 
Protein sequence
MKNFIYNSTI WIRITCISIL LSGCSLLPNS QVEVQKKDNI DYWSDSSGSW ENWDENHPSN 
ELVAWTYDKD GIQVNFVARP ELNIFGQRSH TLVVKIVQLS EVSGINTLFQ TNEGIAAALT
QETEMIPNAI FSESFVLGPK QNLMFRLARQ ENAKYIAIIA GFAELDRRQA VRIIPISVNT
TLQEPIDAEW TTLDKMTFGY FVSKEPQPDI LRPSNIRLNI DFGENSITKF SATAE