| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0012 |
|---|
| Symbol | |
|---|
| ID | 4625101 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychromonas ingrahamii 37 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008709 |
|---|
| Strand | + |
|---|
| Start bp | 18217 |
|---|
| End bp | 19665 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 639795205 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_941486 |
|---|
| Protein GI | 119943806 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGCAA TAAAAGAAGA ATCATTAGTT GGAAGTATAT TAGGTTTAAG CAAGCTTTTA
AGTGACCCAT ATAGTTATGA TATTGCAAGT CAAGGGATGC AAACGCTGCT CACTCAGGTA
CTTGAAGAAG ATTGTGATTT TGATAATCTA AGAGTAGATA AACGTTATGT TGAATCTCTT
ATTGATGAGC TTGATGAAAA ACTCAGTAAG CAAATGGATG AAATTATCCA TAATAGTGTT
TTTCAAGCAC TAGAATCGCC ATGGAGAAGT TTAAAACTGC TAACGGATAG AACAGATTTC
AAAGAAAATA TAAAAATTGA AATATTATCA GTATCCAAAA ATGAGTTACT GGAAGATTTT
GAAGATGCGG CTGATATAAT TGAAACAGGT CTTTATCGTA AAGTTTACAC CGATGAATTC
GGACAATATG GTGGTGATCC CTATGGAGTG ATTATTGGAA ATTATTATAT TTCCCCTTCA
GTCCCCGATA TGAATTTACT GAGTCATATG TCCAGTTTAA GTGCTATGAC ACATGCTCCA
TTTATAACAA GTGCAAGTGA AGAATTTTTT GGACTGGAAG ATTTTGCAGA ATTACCTGAG
TTAAAACAAT TAGAAGCTAT GTTTGAAGGC CCGCAATATT TATCTTGGCG TAACTTTAGA
AGCAGTGATG ATGCCAGAAA TGTCGGCCTC ACTTTACCTC GATTTATGTT AAGGCGAACA
TATGGTGAAA ATATTCCAGT AAGTGCTTTT AACTATAAAG AAAGTATTAA CAACAAGTCA
GAGTACCTAT GGGGCAACGC AGCATTTGCT TATGCAACGC GATTAAATAA CAGTTTTGCA
AAATATCGTT GGTGTCCAAA TATCATCGGT CCGCAATCAG GTGGTGAAGT CGCTGATTTA
CCTATTGATA TCGTTGATGA TAGCGGCACT GATAAAGTTT TTGGACCAGT AGAACTTAAA
GTGTCAGATA GGAAAGAATT TGAATTATCT GAACTTGGTT TTATTCCTTT TACACTCCGA
AAAGACTCTG ACAGTGCAGT CTTTTTCTCA TCTAATTCAA CCCAATTGCC TAAAAAATTC
ACCAATGATG ATGAAGGTAA ACAGGCTGAA ATTAATTACC GTTTAGGTAC ACAACTACCT
TACTTATTTA TAGTAAACAG GCTGGCTCAC TATATTAAGG TATTACAACG CGAAAATTTG
GGTAGTTGGA AGAGTAAAAC AGAGCTAGAA ACAGAGCTTA ATAAATGGAT CAGGCAATAT
GTTGCAGATC AAGATAATCC TTCCGCAGCA ACAAGAAGTC AACGACCACT CAGAAAAGCT
GCAATTTCAG TCAGTGACAT TGATACTGAA GTAGGTTGGT ATTCTGTCGG TATGGAAGTG
ACTCCTCACT TTAAATTTAT GGGAGCAAGT TTCACACTCT CTCTAACCAG TATTTTAGAA
CGAGCTTAA
|
|---|
| Protein sequence | MEAIKEESLV GSILGLSKLL SDPYSYDIAS QGMQTLLTQV LEEDCDFDNL RVDKRYVESL
IDELDEKLSK QMDEIIHNSV FQALESPWRS LKLLTDRTDF KENIKIEILS VSKNELLEDF
EDAADIIETG LYRKVYTDEF GQYGGDPYGV IIGNYYISPS VPDMNLLSHM SSLSAMTHAP
FITSASEEFF GLEDFAELPE LKQLEAMFEG PQYLSWRNFR SSDDARNVGL TLPRFMLRRT
YGENIPVSAF NYKESINNKS EYLWGNAAFA YATRLNNSFA KYRWCPNIIG PQSGGEVADL
PIDIVDDSGT DKVFGPVELK VSDRKEFELS ELGFIPFTLR KDSDSAVFFS SNSTQLPKKF
TNDDEGKQAE INYRLGTQLP YLFIVNRLAH YIKVLQRENL GSWKSKTELE TELNKWIRQY
VADQDNPSAA TRSQRPLRKA AISVSDIDTE VGWYSVGMEV TPHFKFMGAS FTLSLTSILE
RA
|
|---|
| |