Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ping_0010 |
Symbol | |
ID | 4625099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychromonas ingrahamii 37 |
Kingdom | Bacteria |
Replicon accession | NC_008709 |
Strand | - |
Start bp | 16153 |
End bp | 17052 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 639795203 |
Product | tyrosine recombinase XerC |
Protein accession | YP_941484 |
Protein GI | 119943804 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCTT TACAACCTCT TATCGATACC TACTTAAATC ATATTGCCAG CCAGCGTGGT TTGAGCCCTG TTACCATCAC AAACTACCAA AGTAATTTAG CTGAATTTGT TGCCCTGTTA AATGAAAATA AAGTAGGCTG TTGGACAGAG CTTGATGGAC AATTGGTGCG CTTAATGGTT AAAACGCTGC ATAAAAAGGG CCTTAAAGCC CGTTCTATTG CAACCAAACT TTCCGCTTTA CGCTCTTTTT TAGACTATTT AGTACAGTTT GATATTTTAA GTAACAATCC GGCAAAGGGT ATAGCAGCAC CCAAATTAGA TAAGCCACTG CCTAAAAATG TGTCCGTTGA TGATATGTTT CAATTGCTTG ATATAGATGA AAAAGATCCG CTTAGTATCC GTGATCAGTG CATGATGGAA CTGATGTACT CCTCTGGATT ACGCCTTAGT GAGTTAGTTG GTATTAACTT ACAAGATATA AAGTTATCTG CAAAAGAGAT AATGGTAACA GGTAAGGGAA GTAAGCAACG ATTATTACCT ATTACCGATA GAGCGGTTGC GACTGTAAAA ATCTGGCTTA AAATCCGTCC TGAATTTTGT ATAAAGGACG AAAAAGCACT CTTTGTTTCT AAGCAAAAAA AACGTATATC AGCGCGTAAT GTACAGGCTA GAATGGAAAA ATGGGGCTTA AAACAAGCCT TACCGGGCCA TATAAATCCA CATAAATTAC GGCACTCTTT TGCTACCCAT ATGCTTGAAT CAAGTGGTAA CCTGCGTGCG GTGCAAACCT TGCTCGGCCA CGCAGATTTA GCCACAACGC AGATTTATAC CCACCTGGAT TTTCAGCATT TATCAAAAAT TTATGACCAG GCACACCCGC GTGCTAAACG TAAAAAATAA
|
Protein sequence | MSALQPLIDT YLNHIASQRG LSPVTITNYQ SNLAEFVALL NENKVGCWTE LDGQLVRLMV KTLHKKGLKA RSIATKLSAL RSFLDYLVQF DILSNNPAKG IAAPKLDKPL PKNVSVDDMF QLLDIDEKDP LSIRDQCMME LMYSSGLRLS ELVGINLQDI KLSAKEIMVT GKGSKQRLLP ITDRAVATVK IWLKIRPEFC IKDEKALFVS KQKKRISARN VQARMEKWGL KQALPGHINP HKLRHSFATH MLESSGNLRA VQTLLGHADL ATTQIYTHLD FQHLSKIYDQ AHPRAKRKK
|
| |