| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ping_0009 |
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| Symbol | |
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| ID | 4625098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychromonas ingrahamii 37 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008709 |
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| Strand | - |
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| Start bp | 15412 |
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| End bp | 16119 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 639795202 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_941483 |
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| Protein GI | 119943803 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.7922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATACT ACCGGGCAAT TAAACCTTTT AAAGCGATTA GTTTTGATCT TGATGATACG
CTTTATGATA ATCACCATAT CATCAAAAAA GCCAATCAAT CGATTATTGA GCACCTTAAT
CAAACCTATC CTGAGCTGGC AGAATTGACC GAAAAACAGT GGTCATTATA CAAAGATATA
GAAGTGGCGG AATTTCCAGA AATAAAACAT GATGTTTCTT TATGGCGAAC CCAAACACTG
ACTCGAATAA TGATCATTTA CGGGATCCCG GAGTTTAAGG CCATAAAGTA TGCACAACGT
GCATTTTCTG AGTTTTTAAA ACTGCGCAGT GATTTTGTAG TCCCGGAAGC AAGTTTAACG
CTATTAGATA AGTTAGCACA AACTTACCCG ATAATAGCTA TTACTAATGG TAATGTTGAT
GAATTTAAAA TCCAACTTGA TGATAAATTT AAGTTTATTT TAAAAGCGGG TAATGGTTTT
AAATCTAAAC CAGAAGGTGA TTTGTTTATT GAAGCGGCCA GACGTTTAAA TATTGAAGTC
AGTGATATTT TACATGTCGG CGATCATTTA ATTAGTGATG TTTATGGTGC TCAAAACAAT
GGTGCACAAG CCGTTTGGTT TAATCCCAAT AAGCAGTCTC TGAGTGGTGC GATGTTATTA
CCAACCGTGG AAATCAGTCG TTTAGATCAA TTATATAAAC TGCTATAA
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| Protein sequence | MKYYRAIKPF KAISFDLDDT LYDNHHIIKK ANQSIIEHLN QTYPELAELT EKQWSLYKDI
EVAEFPEIKH DVSLWRTQTL TRIMIIYGIP EFKAIKYAQR AFSEFLKLRS DFVVPEASLT
LLDKLAQTYP IIAITNGNVD EFKIQLDDKF KFILKAGNGF KSKPEGDLFI EAARRLNIEV
SDILHVGDHL ISDVYGAQNN GAQAVWFNPN KQSLSGAMLL PTVEISRLDQ LYKLL
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